DPOGS215568 | ||
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Transcript | DPOGS215568-TA | 825 bp |
Protein | DPOGS215568-PA | 274 aa |
Genomic position | DPSCF300097 - 214311-215451 | |
RNAseq coverage | 1225x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL016928 | 2e-89 | 64.98% |   |
Bombyx | BGIBMGA000367-TA | 4e-119 | 79.64% |   |
Drosophila | CG8636-PA | 3e-83 | 57.91% |   |
EBI UniRef50 | UniRef50_Q9VDM6 | 2e-71 | 51.10% | Eukaryotic translation initiation factor 3 subunit G-2 n=28 Tax=Endopterygota RepID=EI3G2_DROME |
NCBI RefSeq | NP_001037586.1 | 6e-117 | 78.91% | eukaryotic translation initiation factor 3 subunit G [Bombyx mori] |
NCBI nr blastp | gi|95102874 | 2e-116 | 79.64% | eukaryotic translation initiation factor 3 subunit 4 [Bombyx mori] |
NCBI nr blastx | gi|95102874 | 1e-122 | 78.83% | eukaryotic translation initiation factor 3 subunit 4 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0000166 | 8.1e-18 | nucleotide binding | |
GO:0003676 | 2.1e-15 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [1-274] IPR017334 | 8.4e-116 | Translation initiation factor 3, RNA-binding subunit | |
[192-272] IPR012677 | 8.1e-18 | Nucleotide-binding, alpha-beta plait | ||
[193-266] IPR000504 | 2.1e-15 | RNA recognition motif domain | ||
Orthology group | MCL10669 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215568-TA
ATGCCTGTTGTCGATGAAATCCAGTCTTCTTGGGCCGATGAAGTGGAAATTGATCAAGGGGAGCTCCCACCACCTTCGGAAGTTGTTGAAAATGGATTAAAAATTGTCACTGAATATAAATACGATAATGATAACAAAAAAGTTAAGATTGTTCGTACATATAAGATAGAAAAACGTGTTGTTTCAAAGAGTATTGCAAAACGTAAAACATGGAACAAATTCGGTGATTCTGCTAATGACAAACCTGGTCCTAATCCTGCCACTACTAATGTTTGTGAGGATGTATTCATGCAGTTTATAACAAGCAAAGAAGAAGCACAGAGACCAGATGAAGGTGATTTGGAAGCTCTGAAGGCAAGACCTACTAAAGTACTATTCAAGTGCCGTACATGCCAAGGAGAACATTGGACTTCAAGTTGTCCATTCCAGCACACACAATTAGCACAATCCAAGGCAATGGAAGCTGCCAAAGCGGCTGAAGCCAAAACCTCATCAACTAAGTATGTTGTACCTCATGCAAGAGAAGGTGCTTCTCATATGAGCCGTGATCAACTAGGAAGAAGAGACGATGTTGCTGCTATTCGTATTTCTAATCTAAGTAACTTTGCTGTTGAAGCTGATCTTGATGATCTTGTTAAACCCTTTGGACCAGTACATAAGTTATATCTCGCTAAAGAAAAGAGTACTGGCCAATGCAAAGGTTTTGCTTATGTGCACTTCAAATTCCGTGATGATGCAGCCAAAGCCATTGAGACTCTGAATGGATATGGTTATGATCATTTAATCTTGAATGTGGAATGGTCCAAACCGCCTCAGAACAACTAA
>DPOGS215568-PA
MPVVDEIQSSWADEVEIDQGELPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWNKFGDSANDKPGPNPATTNVCEDVFMQFITSKEEAQRPDEGDLEALKARPTKVLFKCRTCQGEHWTSSCPFQHTQLAQSKAMEAAKAAEAKTSSTKYVVPHAREGASHMSRDQLGRRDDVAAIRISNLSNFAVEADLDDLVKPFGPVHKLYLAKEKSTGQCKGFAYVHFKFRDDAAKAIETLNGYGYDHLILNVEWSKPPQNN-