| DPOGS215636 | ||
|---|---|---|
| Transcript | DPOGS215636-TA | 858 bp |
| Protein | DPOGS215636-PA | 285 aa |
| Genomic position | DPSCF300041 - 1812110-1822870 | |
| RNAseq coverage | 7x (Rank: top 87%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004518 | 4e-36 | 100.00% | |
| Bombyx | BGIBMGA007917-TA | 3e-19 | 65.57% | |
| Drosophila | CG34367-PC | 3e-50 | 52.02% | |
| EBI UniRef50 | UniRef50_E0VMH1 | 2e-50 | 58.33% | Short stature homeobox protein, putative n=2 Tax=Pediculus humanus corporis RepID=E0VMH1_PEDHC |
| NCBI RefSeq | XP_967102.2 | 1e-53 | 57.80% | PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum] |
| NCBI nr blastp | gi|189234030 | 2e-52 | 57.80% | PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum] |
| NCBI nr blastx | gi|189234030 | 2e-53 | 59.63% | PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 1e-28 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 1e-28 | sequence-specific DNA binding | ||
| GO:0003700 | 1e-28 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 4.8e-28 | DNA binding | ||
| GO:0005515 | 4.7e-25 | protein binding | ||
| GO:0005634 | 9.7e-06 | nucleus | ||
| GO:0007275 | 1.1e-05 | multicellular organismal development | ||
| KEGG pathway | ||||
| InterPro domain | [91-153] IPR001356 | 1e-28 | Homeobox | |
| [67-151] IPR012287 | 4.8e-28 | Homeodomain-related | ||
| [75-150] IPR009057 | 4.7e-25 | Homeodomain-like | ||
| [120-129] IPR000047 | 9.7e-06 | Helix-turn-helix motif, lambda-like repressor | ||
| Orthology group | MCL15350 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215636-TA
ATGGTTATGGAGCGGCTGGCGGACTTCGTCAGCAAGTCTCTGGAGGGAGGAGAGGCCCCGGCGCCACCTCCAGAGCCCGGGGACCACGAAGACATGGACGAGGAAGTGGATATCACAGCTCTTGAAGATAAGGCTCCTCCGGCCAAGCGACCGAGAAATTGGCTGGTGTCTCCTCTCCCAGTACAAAATTACAAAAGAGACGATGATGACGATGATCATAAACACGATATAAATGACAAGTCGAACGGCAGTATCAGCTCGGGTGGTAAGCAGCGTCGTTCACGGACCAACTTCACCCTGGAACAGCTGGGAGAGCTGGAGAGGCTGTTCGATGAAACGCATTACCCTGACGCCTTCATGAGGGAGGAGCTCAGCCAGAGACTAGGGCTCAGCGAGGCCAGGGTGCAGGTGTGGTTTCAAAATCGACGCGCCAAATGTAGGAAACACGAAAGTCAGATGCACAAAGGTCTGCTGGTAGGTGGTAGCGGAACTCCCTTGGAGCCATGTCGCGTGGCACCGTACGTGTCCGTGCCACGGCTGTCGAGCACCACTCAGCGAGCCCCACCACCGCTACCACTCACACCACACCCACCACCTACAGCTTTCGCACCATTCGACTCCGCTATGCTGTCTGCTGCCGCTCACCAGTATGCTAGTGCGGCTGCGGCGGCGGCGGCGGCAGCGTTGTGTCCTCCGTATGCTGGTTTAGCGGCTCTGGCGGCTCGGTGTCGGTCCTCATCTATAGCGGATCTGCGACTGAAGGCTCGCCGGCACGCAGCGGCGCTTGCAGCTGCGAGGGCTCCCTCGCCCTCGAACTCGCCCGCTCCCGCTCCCGCTTCTGCTCCCGCTGACACTTAG
>DPOGS215636-PA
MVMERLADFVSKSLEGGEAPAPPPEPGDHEDMDEEVDITALEDKAPPAKRPRNWLVSPLPVQNYKRDDDDDDHKHDINDKSNGSISSGGKQRRSRTNFTLEQLGELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHESQMHKGLLVGGSGTPLEPCRVAPYVSVPRLSSTTQRAPPPLPLTPHPPPTAFAPFDSAMLSAAAHQYASAAAAAAAAALCPPYAGLAALAARCRSSSIADLRLKARRHAAALAAARAPSPSNSPAPAPASAPADT-