| DPOGS215695 | ||
|---|---|---|
| Transcript | DPOGS215695-TA | 630 bp |
| Protein | DPOGS215695-PA | 209 aa |
| Genomic position | DPSCF300041 - 392786-401117 | |
| RNAseq coverage | 1637x (Rank: top 8%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009656 | 2e-109 | 90.95% | |
| Bombyx | BGIBMGA003597-TA | 6e-103 | 97.80% | |
| Drosophila | Rab6-PA | 4e-112 | 91.30% | |
| EBI UniRef50 | UniRef50_UPI0001757CE1 | 3e-112 | 92.34% | UPI0001757CE1 related cluster n=4 Tax=unknown RepID=UPI0001757CE1 |
| NCBI RefSeq | NP_001040270.1 | 3e-117 | 95.69% | ras small monomeric GTPase Rab6 [Bombyx mori] |
| NCBI nr blastp | gi|114052691 | 5e-116 | 95.69% | ras small monomeric GTPase Rab6 [Bombyx mori] |
| NCBI nr blastx | gi|114052691 | 1e-110 | 95.69% | ras small monomeric GTPase Rab6 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 3.9e-87 | small GTPase mediated signal transduction | |
| GO:0005525 | 3.9e-87 | GTP binding | ||
| GO:0015031 | 3.9e-87 | protein transport | ||
| GO:0016020 | 1.4e-33 | membrane | ||
| GO:0007165 | 1.4e-33 | signal transduction | ||
| GO:0006184 | 1.4e-33 | GTP catabolic process | ||
| GO:0003924 | 1.4e-33 | GTPase activity | ||
| GO:0005622 | 1.1e-12 | intracellular | ||
| GO:0006886 | 2.1e-05 | intracellular protein transport | ||
| GO:0006913 | 2.1e-05 | nucleocytoplasmic transport | ||
| KEGG pathway | ||||
| InterPro domain | [14-177] IPR003579 | 3.9e-87 | Small GTPase superfamily, Rab type | |
| [15-173] IPR001806 | 5.7e-59 | Small GTPase superfamily | ||
| [11-177] IPR020849 | 1.4e-33 | Small GTPase superfamily, Ras type | ||
| [13-169] IPR005225 | 1.9e-28 | Small GTP-binding protein domain | ||
| [16-176] IPR003578 | 1.1e-12 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL13423 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215695-TA
ATGTCTACGTCTGGTGAATTTGGAAACCCCTTGCGCAAATTTAAGCTGGTGTTCCTGGGCGAACAGAGCGTGGGAAAAACTTCTTTGATCACAAGATTCATGTATGACAGCTTTGACAACACTTACCAGGCGACCATCGGTATAGATTTTCTGTCAAAGACAATGTACTTGGAGGACCGAACGGTTCGTCTGCAACTCTGGGACACGGCTGGGCAGGAACGCTTCCGCTCCCTCATACCCTCATACATCAGAGACTCGACTGTGGCAGTTGTGGTGTATGACATCACTAACGCGAACTCATTCCATCAGACCTCCAAATGGATCGATGACGTGCGTACCGAGCGTGGGTCAGACGTCATCATCATGCTGGTCGGCAACAAGACGGACCTCTCGGACAAGAGGCAGGTCTCCACCGAGGACGGAGACAGGAAGGCCAAGGAGCTGAACGTCATGTTCATAGAGACCAGCGCCAAGGCGGGATACAACGTGAAGCAGCTGTTCAGACGCGTCGCAGCAGCTCTGCCCGGCATGGACTCCACGGAGAGCAAGCCGCCTGAAGACATGCATGAGGTGATCCTCCGACAGGCGCCCGGCGATAACAAGGAGCCCGAGAACAGTTGCGCCTGTTAA
>DPOGS215695-PA
MSTSGEFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEDGDRKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTESKPPEDMHEVILRQAPGDNKEPENSCAC-