| DPOGS215802 | ||
|---|---|---|
| Transcript | DPOGS215802-TA | 435 bp |
| Protein | DPOGS215802-PA | 144 aa |
| Genomic position | DPSCF300041 + 2263901-2264607 | |
| RNAseq coverage | 1060x (Rank: top 12%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005810 | 1e-62 | 85.92% | |
| Bombyx | BGIBMGA003520-TA | 1e-57 | 75.19% | |
| Drosophila | mRpL53-PA | 2e-45 | 57.86% | |
| EBI UniRef50 | UniRef50_Q95S87 | 3e-42 | 56.83% | GM05817p n=13 Tax=Pancrustacea RepID=Q95S87_DROME |
| NCBI RefSeq | NP_725343.1 | 4e-44 | 57.86% | mitochondrial ribosomal protein L53 [Drosophila melanogaster] |
| NCBI nr blastp | gi|24653506 | 9e-43 | 57.86% | mitochondrial ribosomal protein L53 [Drosophila melanogaster] |
| NCBI nr blastx | gi|24653506 | 2e-41 | 57.86% | mitochondrial ribosomal protein L53 [Drosophila melanogaster] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ||||
| InterPro domain | [38-85] IPR019716 | 3.8e-08 | Ribosomal protein L53, mitochondrial | |
| Orthology group | MCL14575 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215802-TA
ATGTCTATCCCGTATAGTGGTACTATAAGAAGGTCAGGCGGAGTGGTTTCTGCCATAGGAAAACAGTTACGAGCAGTTAATCTGAAACCTGCAAAACGTATTACAGTTAAATTTGATCCATTTGGAGATAATGTCACACACACAAGGCACTTTGTACATTATATGAGTTCACCGAAAGTAGCTCTAACAAATCCAAATTGCATCTTGAAAACAGAAATTGTTTGTGACCGTAGTGAGCCAACAGTTGACATTAATTTGGTGCCTTCAATAGCAGAAACTGCTAACATACAAAAAGTTACATTCAAAAGTGGTAATTTGACTTGCCTAGAACTACTCCAGTTATTAAATAAACACATATCTGCTTTGGCACCCAAAGAACAAATACCAAATACGATACAAACAAAGTTAGAAAAGAAAAAGGGTAAAAAGAAGTGA
>DPOGS215802-PA
MSIPYSGTIRRSGGVVSAIGKQLRAVNLKPAKRITVKFDPFGDNVTHTRHFVHYMSSPKVALTNPNCILKTEIVCDRSEPTVDINLVPSIAETANIQKVTFKSGNLTCLELLQLLNKHISALAPKEQIPNTIQTKLEKKKGKKK-