DPOGS215804 | ||
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Transcript | DPOGS215804-TA | 579 bp |
Protein | DPOGS215804-PA | 192 aa |
Genomic position | DPSCF300041 + 2285895-2286473 | |
RNAseq coverage | 968x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL005814 | 5e-102 | 88.54% |   |
Bombyx | BGIBMGA003522-TA | 3e-97 | 87.70% |   |
Drosophila | Cyp1-PA | 5e-72 | 75.62% |   |
EBI UniRef50 | UniRef50_UPI000194C79A | 6e-71 | 76.25% | UPI000194C79A related cluster n=1 Tax=unknown RepID=UPI000194C79A |
NCBI RefSeq | NP_001040172.1 | 2e-98 | 87.50% | peptidyl-prolyl cis-trans isomerase [Bombyx mori] |
NCBI nr blastp | gi|114051666 | 4e-97 | 87.50% | peptidyl-prolyl cis-trans isomerase [Bombyx mori] |
NCBI nr blastx | gi|114051666 | 3e-95 | 87.50% | peptidyl-prolyl cis-trans isomerase [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006457 | 3.8e-78 | protein folding | |
GO:0003755 | 3.8e-78 | peptidyl-prolyl cis-trans isomerase activity | ||
KEGG pathway |   | |||
InterPro domain | [26-190] IPR002130 | 3.8e-78 | Peptidyl-prolyl cis-trans isomerase, cyclophilin-type | |
[28-191] IPR015891 | 2.2e-75 | Cyclophilin-like | ||
Orthology group | MCL24917 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215804-TA
ATGGCTTTGACGGCAATGTTACGCCGTACCCTTATAAATGGCACATTATATTCAGCGGCCTCTTTGCGTTTTGCGTCTACACAGCAAGAAAAAAAAGTGTTCTTTGATGTCTCTGCTGATGGCGAACCCTTAGGCCGCATAGTTATGAAACTGAACACAGAAGAGGTCCCGAAGACTGCGGAGAATTTCAGAGCTCTGTGTACTGGAGAGAAAGGATTTGGTTATAAAGGTTCATCGTTCCACAGAATTATTCCTGACTTTATGTGTCAAGGAGGAGATTTCACTAATCACAATGGCACTGGTGGCAAGTCTATCTATGGTAGAACTTTCCAAGATGAGAACTTTAAGTTGAAGCACACTGGCCCCGGCATTCTATCTATGGCTAATGCTGGTCCTAACACAAACGGTTCTCAATTCTTCATTACAACCACTACAACCCCATGGCTGGATAGGAAACATGTTGTATTTGGATCAGTAGTTGAAGGAATGGATGTTGTGCGTAAAATGGAAAATCTTGGGTCAAAAAGTGGTAGACCTTCTAAAAAGGTTGTTATCCACGAATGTGGTGAGTTAGACTGA
>DPOGS215804-PA
MALTAMLRRTLINGTLYSAASLRFASTQQEKKVFFDVSADGEPLGRIVMKLNTEEVPKTAENFRALCTGEKGFGYKGSSFHRIIPDFMCQGGDFTNHNGTGGKSIYGRTFQDENFKLKHTGPGILSMANAGPNTNGSQFFITTTTTPWLDRKHVVFGSVVEGMDVVRKMENLGSKSGRPSKKVVIHECGELD-