| DPOGS215812 | ||
|---|---|---|
| Transcript | DPOGS215812-TA | 393 bp |
| Protein | DPOGS215812-PA | 130 aa |
| Genomic position | DPSCF300073 - 523482-523968 | |
| RNAseq coverage | 534x (Rank: top 24%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011654 | 8e-67 | 91.11% | |
| Bombyx | BGIBMGA013551-TA | 2e-63 | 87.31% | |
| Drosophila | MED11-PA | 4e-43 | 71.43% | |
| EBI UniRef50 | UniRef50_Q9VVS4 | 6e-41 | 71.43% | Mediator of RNA polymerase II transcription subunit 11 n=4 Tax=melanogaster group RepID=MED11_DROME |
| NCBI RefSeq | XP_974541.1 | 2e-45 | 76.79% | PREDICTED: similar to Mediator complex subunit 11 CG6884-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91083293 | 4e-44 | 76.79% | PREDICTED: similar to Mediator complex subunit 11 CG6884-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|322789046 | 4e-42 | 80.56% | hypothetical protein SINV_12601 [Solenopsis invicta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006357 | 1e-27 | regulation of transcription from RNA polymerase II promoter | |
| GO:0016592 | 1e-27 | mediator complex | ||
| GO:0001104 | 1e-27 | RNA polymerase II transcription cofactor activity | ||
| KEGG pathway | ||||
| InterPro domain | [6-111] IPR019404 | 1e-27 | Mediator complex, subunit Med11 | |
| Orthology group | MCL13351 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS215812-TA
ATGGCGGGGCCTATTGAAAGAATTCAAGTTCTAGATGAAATTGAAAAGGACATAATAACATGCTTACAATGTGCAGCTCAGGCTCTATTGGAACTTGGTAAAGAGAAGTCGAGTCAAAAGCAGGCTGAGAGTAACACATCGCAATTTCTAAGAACCCTTAGTCAAGTGGAATCAAAATTGAGTGATCAGATCAATTATCTAACCCAAGTTTCTACAGGACAGCCACATGAGGGTTCTGGGTATGCTTCACAGAAAGTGCTACAAATGGCCTGGCATCGACTAGAGCATGTTAGGTCCTGGGTTAATGAGCTGGAAAGACTTAAGGCTTCTCATATGGCAGCCTCATCTAGATCAAATAGCAACATGACTTCCTCGGGCACTAGTACACAGTAA
>DPOGS215812-PA
MAGPIERIQVLDEIEKDIITCLQCAAQALLELGKEKSSQKQAESNTSQFLRTLSQVESKLSDQINYLTQVSTGQPHEGSGYASQKVLQMAWHRLEHVRSWVNELERLKASHMAASSRSNSNMTSSGTSTQ-