DPOGS215904 | ||
---|---|---|
Transcript | DPOGS215904-TA | 390 bp |
Protein | DPOGS215904-PA | 129 aa |
Genomic position | DPSCF300029 + 410482-412835 | |
RNAseq coverage | 4027x (Rank: top 3%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL008645 | 1e-56 | 81.54% |   |
Bombyx | BGIBMGA000273-TA | 2e-40 | 76.07% |   |
Drosophila | Cpr62Bc-PA | 1e-29 | 59.17% |   |
EBI UniRef50 | UniRef50_Q9BPR5 | 3e-31 | 85.71% | Cuticle protein n=2 Tax=Bombyx mori RepID=Q9BPR5_BOMMO |
NCBI RefSeq | NP_001166671.1 | 1e-47 | 77.61% | cuticular protein RR-2 motif 91 [Bombyx mori] |
NCBI nr blastp | gi|290560630 | 3e-46 | 77.61% | cuticular protein RR-2 motif 91 precursor [Bombyx mori] |
NCBI nr blastx | gi|290560630 | 7e-58 | 85.07% | cuticular protein RR-2 motif 91 precursor [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0042302 | 4.3e-17 | structural constituent of cuticle | |
KEGG pathway |   | |||
InterPro domain | [61-113] IPR000618 | 4.3e-17 | Insect cuticle protein | |
Orthology group | MCL18967 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS215904-TA
ATGATCGCTAGAGTCGCAGTAATCCTGTCCGTGCTGGCATTAGCAGCAGCTGGTGTGGTCCAAATCGGCCACGGATACAGCGGCGAGGGCTATGGCCACGAAGCAGCATACGCACCAGTTGCTCAAGTAGCTCAGTATGAGGGGCACGACGAACACGTCGATTACCATGCCCACCCTAAATACGACTACTCGTACTCTGTGTCTGACCCTCACACCGGGGATCACAAGGAACAGCACGAAGCTCGTGATGGCGATGTCGTAAAGGGCGAGTACTCTCTTCTTCAACCTGACGGTTCTTTCCGCAAGGTCACTTACACCGCTGATGATCACAACGGTTTCAACGCAGTAGTCCACAACACAGCGCCAGTCCATCCCGAGTACCACCACTAA
>DPOGS215904-PA
MIARVAVILSVLALAAAGVVQIGHGYSGEGYGHEAAYAPVAQVAQYEGHDEHVDYHAHPKYDYSYSVSDPHTGDHKEQHEARDGDVVKGEYSLLQPDGSFRKVTYTADDHNGFNAVVHNTAPVHPEYHH-