Monarch geneset OGS2.0

DPOGS215932
TranscriptDPOGS215932-TA618 bp
ProteinDPOGS215932-PA205 aa
Genomic positionDPSCF300308 - 112541-113283
RNAseq coverage6498x (Rank: top 2%)
Annotation
HeliconiusHMEL0041619e-120100.00% 
BombyxBGIBMGA001966-TA6e-11999.51% 
DrosophilaRho1-PB1e-10595.31% 
EBI UniRef50UniRef50_P481481e-10395.31%Ras-like GTP-binding protein Rho1 n=169 Tax=Opisthokonta RepID=RHO1_DROME
NCBI RefSeqNP_001158356.13e-10696.88%Ras-like GTP-binding protein Rho1 [Tribolium castaneum]
NCBI nr blastpgi|3323758634e-10591.26%unknown [Dendroctonus ponderosae]
NCBI nr blastxgi|1582926744e-10693.24%AGAP005160-PA [Anopheles gambiae str. PEST]
Group
Gene OntologyGO:00072641.5e-131small GTPase mediated signal transduction
GO:00056221.5e-131intracellular
GO:00055251.5e-131GTP binding
GO:00150319.5e-25protein transport
GO:00160205.5e-22membrane
GO:00071655.5e-22signal transduction
GO:00061845.5e-22GTP catabolic process
GO:00039245.5e-22GTPase activity
KEGG pathwaytca:6633378e-106 
 K04513 (RHOA)maps-> Axon guidance
    Pathogenic Escherichia coli infection
    Regulation of actin cytoskeleton
    Pathways in cancer
    Chemokine signaling pathway
    Leukocyte transendothelial migration
    Neurotrophin signaling pathway
    T cell receptor signaling pathway
    TGF-beta signaling pathway
    Focal adhesion
    Colorectal cancer
    Tight junction
    Bacterial invasion of epithelial cells
    Adherens junction
    Wnt signaling pathway
    Endocytosis
    Vascular smooth muscle contraction
InterPro domain[21-194] IPR0035781.5e-131Small GTPase superfamily, Rho type
[20-192] IPR0018067e-59Small GTPase superfamily
[18-172] IPR0052257.9e-45Small GTP-binding protein domain
[20-194] IPR0035799.5e-25Small GTPase superfamily, Rab type
[20-194] IPR0208495.5e-22Small GTPase superfamily, Ras type
Orthology groupMCL15273 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215932-TA
ATGTGGTGGTGCTGTTCTTCTTCCGCTAGTTCAGGACCGATGGCTGCGATACGCAAAAAATTAGTGATTGTTGGTGATGGTGCATGCGGTAAAACATGCCTGTTAATTGTATTTAGCAAAGATCAGTTCCCGGAAGTGTATGTGCCGACAGTGTTCGAAAACTACGTTGCCGACATCGAGGTTGACGGCAAACAGGTGGAATTAGCCTTATGGGATACAGCCGGTCAGGAAGATTACGATCGACTGAGGCCACTCTCGTACCCCGACACCGATGTGATCCTCATGTGCTTCTCGGTGGACTCGCCGGACTCGCTCGAGAACATCCCGGAGAAGTGGACACCCGAGGTGAAACACTTCTGCCCTAATGTGCCTATAATCCTGGTGGGCAACAAGAAGGATCTGCGTAACGACCCGGCCACTATCAACGAGCTGCGCAAGATGAAGCAGGAGCCTGTGAAGCCTCAGGAAGGTCGTGCTATGGCTGAGAAGATCAATGCCTTCGCATACCTCGAGTGCTCTGCTAAAAGCAAGGAGGGTGTGCGCGAAGTGTTCGAGACGGCCACCCGTGCCGCGTTACAAGTCAAGAAGAAGAAGAAGACTAGGTGTTCTCTGCTGTAA

Protein sequence:

>DPOGS215932-PA
MWWCCSSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL-