DPOGS215932 | ||
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Transcript | DPOGS215932-TA | 618 bp |
Protein | DPOGS215932-PA | 205 aa |
Genomic position | DPSCF300308 - 112541-113283 | |
RNAseq coverage | 6498x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL004161 | 9e-120 | 100.00% |   |
Bombyx | BGIBMGA001966-TA | 6e-119 | 99.51% |   |
Drosophila | Rho1-PB | 1e-105 | 95.31% |   |
EBI UniRef50 | UniRef50_P48148 | 1e-103 | 95.31% | Ras-like GTP-binding protein Rho1 n=169 Tax=Opisthokonta RepID=RHO1_DROME |
NCBI RefSeq | NP_001158356.1 | 3e-106 | 96.88% | Ras-like GTP-binding protein Rho1 [Tribolium castaneum] |
NCBI nr blastp | gi|332375863 | 4e-105 | 91.26% | unknown [Dendroctonus ponderosae] |
NCBI nr blastx | gi|158292674 | 4e-106 | 93.24% | AGAP005160-PA [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0007264 | 1.5e-131 | small GTPase mediated signal transduction | |
GO:0005622 | 1.5e-131 | intracellular | ||
GO:0005525 | 1.5e-131 | GTP binding | ||
GO:0015031 | 9.5e-25 | protein transport | ||
GO:0016020 | 5.5e-22 | membrane | ||
GO:0007165 | 5.5e-22 | signal transduction | ||
GO:0006184 | 5.5e-22 | GTP catabolic process | ||
GO:0003924 | 5.5e-22 | GTPase activity | ||
KEGG pathway | tca:663337 | 8e-106 |   | |
  | K04513 (RHOA) | maps-> | Axon guidance | |
  |   |   | Pathogenic Escherichia coli infection | |
  |   |   | Regulation of actin cytoskeleton | |
  |   |   | Pathways in cancer | |
  |   |   | Chemokine signaling pathway | |
  |   |   | Leukocyte transendothelial migration | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | T cell receptor signaling pathway | |
  |   |   | TGF-beta signaling pathway | |
  |   |   | Focal adhesion | |
  |   |   | Colorectal cancer | |
  |   |   | Tight junction | |
  |   |   | Bacterial invasion of epithelial cells | |
  |   |   | Adherens junction | |
  |   |   | Wnt signaling pathway | |
  |   |   | Endocytosis | |
  |   |   | Vascular smooth muscle contraction | |
InterPro domain | [21-194] IPR003578 | 1.5e-131 | Small GTPase superfamily, Rho type | |
[20-192] IPR001806 | 7e-59 | Small GTPase superfamily | ||
[18-172] IPR005225 | 7.9e-45 | Small GTP-binding protein domain | ||
[20-194] IPR003579 | 9.5e-25 | Small GTPase superfamily, Rab type | ||
[20-194] IPR020849 | 5.5e-22 | Small GTPase superfamily, Ras type | ||
Orthology group | MCL15273 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215932-TA
ATGTGGTGGTGCTGTTCTTCTTCCGCTAGTTCAGGACCGATGGCTGCGATACGCAAAAAATTAGTGATTGTTGGTGATGGTGCATGCGGTAAAACATGCCTGTTAATTGTATTTAGCAAAGATCAGTTCCCGGAAGTGTATGTGCCGACAGTGTTCGAAAACTACGTTGCCGACATCGAGGTTGACGGCAAACAGGTGGAATTAGCCTTATGGGATACAGCCGGTCAGGAAGATTACGATCGACTGAGGCCACTCTCGTACCCCGACACCGATGTGATCCTCATGTGCTTCTCGGTGGACTCGCCGGACTCGCTCGAGAACATCCCGGAGAAGTGGACACCCGAGGTGAAACACTTCTGCCCTAATGTGCCTATAATCCTGGTGGGCAACAAGAAGGATCTGCGTAACGACCCGGCCACTATCAACGAGCTGCGCAAGATGAAGCAGGAGCCTGTGAAGCCTCAGGAAGGTCGTGCTATGGCTGAGAAGATCAATGCCTTCGCATACCTCGAGTGCTCTGCTAAAAGCAAGGAGGGTGTGCGCGAAGTGTTCGAGACGGCCACCCGTGCCGCGTTACAAGTCAAGAAGAAGAAGAAGACTAGGTGTTCTCTGCTGTAA
>DPOGS215932-PA
MWWCCSSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL-