DPOGS215945 | ||
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Transcript | DPOGS215945-TA | 462 bp |
Protein | DPOGS215945-PA | 153 aa |
Genomic position | DPSCF300308 + 41431-43815 | |
RNAseq coverage | 128x (Rank: top 57%) |
Annotation | ||||
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Heliconius | % |   | ||
Bombyx | BGIBMGA001953-TA | 7e-10 | 68.18% |   |
Drosophila | bl-PC | 5e-18 | 48.86% |   |
EBI UniRef50 | UniRef50_F4WCX0 | 7e-24 | 61.63% | Heterogeneous nuclear ribonucleoprotein K n=5 Tax=Endopterygota RepID=F4WCX0_ACREC |
NCBI RefSeq | XP_392536.3 | 8e-24 | 59.77% | PREDICTED: similar to bancal CG13425-PC, isoform C [Apis mellifera] |
NCBI nr blastp | gi|332027896 | 3e-23 | 61.63% | Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior] |
NCBI nr blastx | gi|332027896 | 1e-22 | 61.63% | Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior] |
Group | ||||
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Gene Ontology | GO:0003723 | 4.6e-06 | RNA binding | |
KEGG pathway | ame:409007 | 2e-23 |   | |
  | K12886 (HNRNPK) | maps-> | Spliceosome | |
InterPro domain | [86-111] IPR018111 | 4.6e-06 | K Homology, type 1, subgroup | |
Orthology group | MCL35077 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS215945-TA
ATGGAGACGTCCGGTGCGCCGCTACAACGCTCTCGGTTGCCGGTCCCGCCGCCGCCGCCTGCCGCCGCCCCGTCGCAGTACAAAGCCTCTATAACAGTCCCAGATTGCCCTGGCCCCGAACGAGTACTCTCCATAACGGCCTCGGATATCGACACTATTATGGAAATCGTAAAAGAGATACTGCCCAATCTGGCTGACGCCTCAGGGCCAGGTTCAGGGACGAAACACGGCGGCAGTAGTGACGACTTGGACGTCCGTCTGTTGATACATCAGAGCCGGGCCGGTTGTGTGATTGGGAAGGCTGGTGCGAAGATCAAGGAGCTCAGAGAGCGGATTCCGATCGTGTCAATGGACTCTACCTGTGAGGACAAAACGCCTGAAATATATGCGAGTAAACATAATGGTAGAATGGTTTTAACGTTCCGCGACGCCGTATCATCAATAGGATACCGTCAATTGTGA
>DPOGS215945-PA
METSGAPLQRSRLPVPPPPPAAAPSQYKASITVPDCPGPERVLSITASDIDTIMEIVKEILPNLADASGPGSGTKHGGSSDDLDVRLLIHQSRAGCVIGKAGAKIKELRERIPIVSMDSTCEDKTPEIYASKHNGRMVLTFRDAVSSIGYRQL-