Monarch geneset OGS2.0

DPOGS215987
TranscriptDPOGS215987-TA900 bp
ProteinDPOGS215987-PA299 aa
Genomic positionDPSCF300078 - 133767-135613
RNAseq coverage113x (Rank: top 59%)
Annotation
HeliconiusHMEL0180392e-14191.22% 
BombyxBGIBMGA000931-TA1e-13986.50% 
DrosophilaPop2-PD2e-11378.57% 
EBI UniRef50UniRef50_G6D8B82e-177100.00%Ccr4-associated factor n=15 Tax=Eukaryota RepID=G6D8B8_DANPL
NCBI RefSeqXP_001660002.12e-12180.23%ccr4-associated factor [Aedes aegypti]
NCBI nr blastpgi|1571230903e-12080.23%ccr4-associated factor [Aedes aegypti]
NCBI nr blastxgi|1571230902e-11875.90%ccr4-associated factor [Aedes aegypti]
Group
Gene OntologyGO:00036761.8e-86nucleic acid binding
GO:00056341.6e-66nucleus
KEGG pathwayaag:AaeL_AAEL0094004e-121 
 K12581 (CNOT7_8, CAF1, POP2)maps-> RNA degradation
InterPro domain[13-282] IPR0123371.8e-86Ribonuclease H-like
[27-258] IPR0069411.6e-66Ribonuclease CAF1
Orthology groupMCL12624 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS215987-TA
ATGACTTTGCAAATGCCGGCTGTTAACTTTGATTTATTGAAGTCTAAAACCTATAGAGAAGAAAATCACTTTATTAAAAATGTTTGGAAGCATAACTTACACGAGGAGTTTCATCTTATTAGACAGATTGTACAGAAGTATCAATGGGTTGCAATGGACACAGAGTTTCCAGGAGTAGTTGCTAGGCCGATAGGTGAATTTCGTTCTACTGCGGACTACCAATATCAACTTTTAAGATGCAATGTAGATCTCCTGCGAATAATACAATTAGGACTTACTTTTATGGATGAAAATGGTAAAACGCCTCCAGGTTGCACTACATGGCAATTTAATTTTAAATTCAATTTACAATCTCTTAAAAACAGGGAAGATATGTATGCTCAAGATTCCATTGATCTGCTTCAAAATTCTGGATTACAATTTAGAGAGCATGAGGAACATGGGATAGAACCCATTGAATTTGCAGAACTATTGATTACCTCAGGAATAGTTTTAATGGATAACATAAATTGGTTAAGTTTTCATTCTGGGTATGACTTTGGCTATTTGCTAAAATTGCTCACTGATCAAAACTTACCCCAAGAGGAAAGTGACTTCTTTGAAAGTCTTAAACTATATTTTCCTACAGTTTATGATGTTAAATACCTTATGAAATTATGTAAAAACCTAAAAGGTGGATTGCAAGAGGTAGCCGATCAATTGGAGTTGAGGAGGGTGGGACCACAACACCAGGCTGGTTCCGATTCCCATCTAACTGGGATGGCATTTTTCAAAATAAAAGAGATTTTCTTTGATGGCAAGATTGAGAGTACCAGTGGACACCTTTATGGTTTAGGAGCACCATCTTCCCCCATCAATAATATTGTCCAAGAATGTGTTGAAAACGGAAGCTCACCTTAA

Protein sequence:

>DPOGS215987-PA
MTLQMPAVNFDLLKSKTYREENHFIKNVWKHNLHEEFHLIRQIVQKYQWVAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGCTTWQFNFKFNLQSLKNREDMYAQDSIDLLQNSGLQFREHEEHGIEPIEFAELLITSGIVLMDNINWLSFHSGYDFGYLLKLLTDQNLPQEESDFFESLKLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSHLTGMAFFKIKEIFFDGKIESTSGHLYGLGAPSSPINNIVQECVENGSSP-