Monarch geneset OGS2.0

DPOGS216154
TranscriptDPOGS216154-TA312 bp
ProteinDPOGS216154-PA103 aa
Genomic positionDPSCF300155 - 407178-408952
RNAseq coverage18486x (Rank: top 1%)
Annotation
HeliconiusHMEL0165471e-4091.57% 
BombyxBGIBMGA004231-TA9e-3168.54% 
DrosophilaCG11015-PA3e-2547.15% 
EBI UniRef50UniRef50_Q1HPX01e-4372.27%Cytochrome c oxidase polypeptide Vb n=2 Tax=Endopterygota RepID=Q1HPX0_BOMMO
NCBI RefSeqNP_001106742.12e-4472.27%cytochrome c oxidase polypeptide Vb [Bombyx mori]
NCBI nr blastpgi|1644486605e-4372.27%cytochrome c oxidase polypeptide Vb [Bombyx mori]
NCBI nr blastxgi|1644486601e-4272.27%cytochrome c oxidase polypeptide Vb [Bombyx mori]
Group
Gene OntologyGO:00057401.6e-23mitochondrial envelope
GO:00041291.6e-23cytochrome-c oxidase activity
KEGG pathwayaga:AgaP_AGAP0087244e-26 
 K02265 (COX5B)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Cardiac muscle contraction
    Parkinson's disease
InterPro domain[1-97] IPR0021241.6e-23Cytochrome c oxidase, subunit Vb
Orthology groupMCL10510 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS216154-TA
ATGGCTTCGTTGTGTAGACAAATTATCCGTGCAAATGCTGTTAGGAGTGCGCTCCTTTCAACCGCTCGACGGGGATATGCTGACAAAATGATGCCTGACCCCCTCGAGCATGCCACTGGTCTTGAGAAAAAGGAACTGCTGGCAATGCAGTCTGGTAATGACGATCCTTTCAACATGAAAGTTCTCAAGAAAGCTGCTGGCACCCGTGACCAACCAACACTAGTACCCTCCTGCTTTGACGCTAGAATTGATCACCCACGTCGCTGTGAATGTGGACACTGGTACAAGCTTACCGAGAAGGCGCCCCTTTAA

Protein sequence:

>DPOGS216154-PA
MASLCRQIIRANAVRSALLSTARRGYADKMMPDPLEHATGLEKKELLAMQSGNDDPFNMKVLKKAAGTRDQPTLVPSCFDARIDHPRRCECGHWYKLTEKAPL-