DPOGS216208 | ||
---|---|---|
Transcript | DPOGS216208-TA | 597 bp |
Protein | DPOGS216208-PA | 198 aa |
Genomic position | DPSCF300080 + 517744-518340 | |
RNAseq coverage | 102x (Rank: top 61%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015841 | 2e-57 | 61.11% |   |
Bombyx | BGIBMGA004515-TA | 4e-69 | 64.09% |   |
Drosophila | l(2)efl-PA | 5e-40 | 48.59% |   |
EBI UniRef50 | UniRef50_Q5R1P4 | 3e-67 | 64.09% | Heat shock protein hsp23.7 n=17 Tax=Pancrustacea RepID=Q5R1P4_BOMMO |
NCBI RefSeq | NP_001036942.1 | 6e-68 | 64.09% | heat shock protein hsp23.7 [Bombyx mori] |
NCBI nr blastp | gi|112983144 | 9e-67 | 64.09% | heat shock protein hsp23.7 precursor [Bombyx mori] |
NCBI nr blastx | gi|112983144 | 6e-64 | 61.03% | heat shock protein hsp23.7 precursor [Bombyx mori] |
Group | ||||
---|---|---|---|---|
KEGG pathway | dme:Dmel_CG4533 | 3e-38 |   | |
  | K09542 (CRYAB) | maps-> | Protein processing in endoplasmic reticulum | |
InterPro domain | [76-170] IPR002068 | 2.1e-26 | Heat shock protein Hsp20 | |
[27-39] IPR001436 | 2.6e-25 | Alpha crystallin/Heat shock protein | ||
[62-171] IPR008978 | 2.2e-16 | HSP20-like chaperone | ||
Orthology group | MCL30260 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS216208-TA
ATGGATAAGCTAGTTTATTTACTTTTCATCACTGGTATTCTAACTGGTGCATACTGTGACGAAGAATGTTCAAGAAAGCGAAGGAACAGTTTACTCGATCAAGATTTCGGTATGTCATTGACGGATGACGATTTAATCACCACAATGATGGCTCCTTTGATGTTAAGAAACTACTTCAGACCCTGGCGCTACCTTGAACCAATGGCAAGGGATATCGGTTCCACTATCAAGACGGATAAGGATAAATTTACGATCAACGTCGATGTTCAACATTTCGCACCTGACGAAATAACTGTAAGAACTGCGGAGGGTTACGTTATAGTTGAAGCGAAACATGAAGAGAAGCAAGACGAACACGGCTTTGTTTCTCGTCAGTTCATGAGGAGATACTCATTGCCAGAAGGTGTCGAGTCTGAAGATGTTTTATCAGAGCTCTCGAGCGACGGCATCTTGACAATCTCGGCTCCAAGGAAAGATGTTGATAAAAAAGGAGAGAGAATTGTTACAATAACTAAGACTGGACCCGTGCGTAAACAAGCAAAGGAGACGAAAGAGGAAAGTTGCTCTGCCGATACTTGTGAAAAACCTAAAGAATAA
>DPOGS216208-PA
MDKLVYLLFITGILTGAYCDEECSRKRRNSLLDQDFGMSLTDDDLITTMMAPLMLRNYFRPWRYLEPMARDIGSTIKTDKDKFTINVDVQHFAPDEITVRTAEGYVIVEAKHEEKQDEHGFVSRQFMRRYSLPEGVESEDVLSELSSDGILTISAPRKDVDKKGERIVTITKTGPVRKQAKETKEESCSADTCEKPKE-