| New model in OGS2.0 | DPOGS209624 |
|---|---|
| Genomic Position | scaffold305:+ 96956-106918 |
| See gene structure | |
| CDS Length | 2334 |
| Paired RNAseq reads | 1741 |
| Single RNAseq reads | 5613 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006689 (7e-89) |
| Best Drosophila hit | CG17544, isoform D (1e-99) |
| Best Human hit | peroxisomal acyl-coenzyme A oxidase 3 isoform a (1e-72) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000011863 [Nasonia vitripennis] (5e-124) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000011863 [Nasonia vitripennis] (2e-120) |
| GeneOntology terms | GO:0016402 pristanoyl-CoA oxidase activity GO:0055114 oxidation reduction GO:0003995 acyl-CoA dehydrogenase activity GO:0006635 fatty acid beta-oxidation GO:0050660 FAD binding GO:0005777 peroxisome |
| InterPro families | IPR023570 Acyl-CoA oxidase, peroxisomal IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR002655 Acyl-CoA oxidase, C-terminal IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR009100 Acyl-CoA dehydrogenase/oxidase IPR012258 Acyl-CoA oxidase |
| Orthology group | MCL10397 |
Nucleotide sequence:
ATGGAAGATCTTAGTTTTGTCCCGGATCTCCCGAAGGGGCCCCTAGACGTTTATCGAAAT
ACCGCCTCCTTTAACTGGAAGCGACTTAAATTGGCCCTTGAAGGCGATATTGATTCACTA
AAATTAAAGTACAAGATATGGCGGACGTTGGAAAAGGATCCCTTGTTTGCACATTCCGCT
GTGACATTACCAGTTGAAGAACAGAAGAGAATCACTCAGCTGCAGTTAAAGAAGATCAAC
GAGTACAAGTTCATACCGAAAGAGATGTTCAACGCCAGCTACAGCAACGCCCATTATGTC
CGTATATTCTTCTTTCAGACGCGAACCATAATGACTATCAACGAGGCCGTGCAGTCCCTC
AACCCCAGCGTGTCAGTGAAGATGGCCATCGGTATATATCTGTTCTCCAACGCGCTGCTC
TCGCTCGGCACCGAGAGGCATTTGAAATTCTACGAAGCAACCATTAAAACGCGTGAGATC
CTAGCAAGTTTCGCTCTAACGGAGGTGGCGCACGGGTCGGACGCGCGTCTGATGCGGACC
ACCGCCACCTATGACCCCTCCACCCGGGAGTTCGTCATCCACACGCCGGACTTCGAAGCA
GCCAAATGCTGGGTTGGTAATCTAGGTAGGACTTGCACACACACGCTGCTGTTCGCCCAG
CTGATCACACCGGACGGCACCAACCACGGCCTGCACGGGTTCATGGTGCCCATAAGGAAC
CCGGACACGCTGGAGACGTACCCCGGCCTCATAGTGGGGGACATGGGAGAGAAGATCGGC
GTCAACGGTATCGACAACGGAGGGGGAAACGAGAAGACGGCCTACCTGATGGAGGTAGTT
ACCGTCGCTCATGGACATCCGCAACATAGTTTTGCGGATACGTTGCCACCGTTGTTAAGT
GAAGAGAGAGAGAGAGGAAAGGGTGGGAAAAAGGAAAGGGCAACCGGCTCTCTCACTCAT
CGGACGAAACGCAGCCTTCTAGAGAGGTTGAGCCAGCCCACGTTCGAGCCAAATTGCCGC
AGCTCGAACGTGGGCCGGCTCAACCGGTTCATAATGTTCAATCAGTACCGGATACCGCGG
GAGAACCTTCTGAACAGAACTGCTGACGTCACAGAGGATGGCACCTACGAGAGTTCCTTC
TCAGAACCTTCCAGAATACTGGGAGCGGCTCTGGAGAATCTGTCTGCTGGTCGTATCGGC
ATCATGCAGGAGAGCTGTCATTCTCTGTCCAGCGCCGTGTCTATAGCGGTGAGGTACGCT
GCTTCCAGGACACAGTTCGGGGACAGACAGAAGGAAACACCGCTCATCGAGTACGAACTA
CACCAATGGCGTCTGTTCGGCCACGTGGCGGCCGCGGTCGTGTTCAGACTGTATATAGAG
AGCTTCACCAAGACATACCTCGAGATAGCAGAGAAATCCAACGCGGGTCATAGGGTCGAC
AACTTGAGCGAGACGGTGTCTGAGATCCACGCGATGGTGTCCTGCAGTAAGCCGCTGTTG
ACGTGGAGCGTGCTGAGGGCGGCGCAGCAATGTAGGGAGGCCTGCGGCGGACACGGCTAC
CTTAAGTGTTCGAACCTGGGCGACATCCGCAGCAACCACGAGCCGACCGTGACGTACGAG
GGAGACAACAACGTGCTGTCGCAGCAGGCCGGCAACTGGCTGCTGAGGCAGTACGAGGCG
GCGCGAGGGGGCGCGCTCCCCGACACGCCGCTCGGCACGCTCGCCTTCCTCACGGACGAC
GCCAGCCTCCACCGCACCTTCGCCTGCACCAGCACCGAACAGCTCAAGAATCCCGACTTC
ATACTATCGACATACAAGTGGCTTCTGACCTGGATGTTGAAGTACACGCACGAGAAGAAC
GAGTCCGAGCTGGCCAAGGGTCTGACGAAGGTCCAGGCGAGGAACAAGTCGCAGGTGTAC
AGGTGGAGGACCCTCACCAAGGTGTACGCTGAGTACCTCACGCTCATGATATCGCTGGGG
AGCATCGACAGGAAGGAGCCGGGGCTCAAGCCGGTGTTGATGAAGCTGTACTGCCTCTAC
GGACTCAGTGTGCTGGACGAGAACCTGGTGGAGCTGTACCAGGGAGGGTTCGCCAAGGGC
GGGGACTGCGCGCGCCTCGTACGAGACGCTATCCTGGAACTGTGCGCGGACGTGAAGGGC
GAGGTGGTGAGCGTGGTGGACGCACTCGCTCCCACTGACTTCGTTCTCAACTCTGTGTTG
GGCAGGAGCGACGGAAAGCTGTACCAGAACCTCCAGAAGTCGTTCTTCAGCCAGCCCGGT
GTGTTCGAGCGCGCTCGCTGGTGGCGCGAAGTGGTTCCCGCATCCAAACTATAA
Protein sequence:
MEDLSFVPDLPKGPLDVYRNTASFNWKRLKLALEGDIDSLKLKYKIWRTLEKDPLFAHSA
VTLPVEEQKRITQLQLKKINEYKFIPKEMFNASYSNAHYVRIFFFQTRTIMTINEAVQSL
NPSVSVKMAIGIYLFSNALLSLGTERHLKFYEATIKTREILASFALTEVAHGSDARLMRT
TATYDPSTREFVIHTPDFEAAKCWVGNLGRTCTHTLLFAQLITPDGTNHGLHGFMVPIRN
PDTLETYPGLIVGDMGEKIGVNGIDNGGGNEKTAYLMEVVTVAHGHPQHSFADTLPPLLS
EERERGKGGKKERATGSLTHRTKRSLLERLSQPTFEPNCRSSNVGRLNRFIMFNQYRIPR
ENLLNRTADVTEDGTYESSFSEPSRILGAALENLSAGRIGIMQESCHSLSSAVSIAVRYA
ASRTQFGDRQKETPLIEYELHQWRLFGHVAAAVVFRLYIESFTKTYLEIAEKSNAGHRVD
NLSETVSEIHAMVSCSKPLLTWSVLRAAQQCREACGGHGYLKCSNLGDIRSNHEPTVTYE
GDNNVLSQQAGNWLLRQYEAARGGALPDTPLGTLAFLTDDASLHRTFACTSTEQLKNPDF
ILSTYKWLLTWMLKYTHEKNESELAKGLTKVQARNKSQVYRWRTLTKVYAEYLTLMISLG
SIDRKEPGLKPVLMKLYCLYGLSVLDENLVELYQGGFAKGGDCARLVRDAILELCADVKG
EVVSVVDALAPTDFVLNSVLGRSDGKLYQNLQKSFFSQPGVFERARWWREVVPASKL