| New model in OGS2.0 | DPOGS208370 |
|---|---|
| Genomic Position | scaffold11:- 6323-9652 |
| See gene structure | |
| CDS Length | 633 |
| Paired RNAseq reads | 60 |
| Single RNAseq reads | 228 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011593 (4e-24) |
| Best Drosophila hit | succinate dehydrogenase C (1e-14) |
| Best Human hit | succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 1 precursor (2e-13) |
| Best NR hit (blastp) | PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] (9e-25) |
| Best NR hit (blastx) | PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] (5e-21) |
| GeneOntology terms | GO:0006105 succinate metabolic process GO:0006121 mitochondrial electron transport, succinate to ubiquinone GO:0000104 succinate dehydrogenase activity GO:0005749 mitochondrial respiratory chain complex II GO:0006099 tricarboxylic acid cycle GO:0008177 succinate dehydrogenase (ubiquinone) activity GO:0009055 electron carrier activity GO:0006979 response to oxidative stress GO:0008340 determination of adult lifespan |
| InterPro families | IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit IPR014314 Succinate dehydrogenase, cytochrome b556 subunit |
| Orthology group | ND |
Nucleotide sequence:
ATGTTGAATATAGTAATTAAATATCATTGCTGCAAAGAAACATCGAGTTTTATGAGATTA
TTGAATAAAAACAGGTCGATTTTCGGGCCACAGTCATCGATTGTGGGTTGCAATTTTCTG
AGATATAAAGGAGTTTGTCCTCCCGCAAGTTCAGGGCCTGGTGCAGCCAAAGGCTCAGGT
CCTGGAAAGGGCGCCAAACATAAGATAACATATCAACCTTACACCGCGCCGCCACCAACG
TGCCATGATTTTAAAAATATGAGTTTAAACCGCCCTATGTCTCCACATCTAACGATTTTC
GCTCCCACCCTACCCGCTATGACATCCATTGTTCAGCGTATTACAGGCATGATAATAACG
TTTTACGCTCTCCTCCTATCCTCTGGAAGTTTGTTCCTGTCGAACGGCGTAGAAACATAC
GTGTCTATTATCCAGAGCTTTGATTTTTCCTTACCTATGGTATTTATTATTAAGATGATG
TTAGGTGCGCCGTTTGTCTATCATTATTTCAACGGTATCCGTTTCGTTATGTGGAATGCT
GGTAAGTGGTTGTCCATCAAAGAAGTTTACGATTCAGCTAAGAAGAGTTTTGTTGCGACA
GCCGTATTAACATTGCTTTTCTCCATAATTTAA
Protein sequence:
MLNIVIKYHCCKETSSFMRLLNKNRSIFGPQSSIVGCNFLRYKGVCPPASSGPGAAKGSG
PGKGAKHKITYQPYTAPPPTCHDFKNMSLNRPMSPHLTIFAPTLPAMTSIVQRITGMIIT
FYALLLSSGSLFLSNGVETYVSIIQSFDFSLPMVFIIKMMLGAPFVYHYFNGIRFVMWNA
GKWLSIKEVYDSAKKSFVATAVLTLLFSII