| New model in OGS2.0 | DPOGS206276 |
|---|---|
| Genomic Position | scaffold1236:- 9868-10389 |
| See gene structure | |
| CDS Length | 330 |
| Paired RNAseq reads | 75 |
| Single RNAseq reads | 845 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010723 (1e-45) |
| Best Drosophila hit | snRNP2 (1e-39) |
| Best Human hit | small nuclear ribonucleoprotein Sm D2 isoform 1 (4e-34) |
| Best NR hit (blastp) | small nuclear ribonucleoprotein sm d2 [Bombyx mori] (2e-56) |
| Best NR hit (blastx) | small nuclear ribonucleoprotein sm d2 [Bombyx mori] (2e-43) |
| GeneOntology terms | GO:0030532 small nuclear ribonucleoprotein complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0007052 mitotic spindle organization GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain |
| Orthology group | MCL12902 |
Nucleotide sequence:
ATGACTCTAGAAGAGCTAGCTAAGATAGAAGAGGAAGAATTCAGCACAGGTCCGCTTTCG
GTTCTCACACAGTCCGTCAAAAATAATACACAAGTGTTAATAAATTGTCGTAACAATAAA
AAGTTATTGGGTCGTGTAAAAGCCTTTGACCGGCATTGCAACATGGTGTTAGAAAATGTT
AAAGAAATGTGGACCGAAGTTCCAAGGACGGGGAAAGGCAAAAAGGGTAAAGCTGTGAAC
AAAGATAAGTTCATATCAAAGATGTTCCTCCGAGGTGATTCAGTTATCTTAGTCCTCAGG
AATCCTCTAGCTACTGCTGCTGGAAAGTAA
Protein sequence:
MTLEELAKIEEEEFSTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENV
KEMWTEVPRTGKGKKGKAVNKDKFISKMFLRGDSVILVLRNPLATAAGK