| New model in OGS2.0 | DPOGS209545 |
|---|---|
| Genomic Position | scaffold1231:- 38030-62213 |
| See gene structure | |
| CDS Length | 1407 |
| Paired RNAseq reads | 23 |
| Single RNAseq reads | 97 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012416 (0.0) |
| Best Drosophila hit | nicotinic acetylcholine receptor beta 96A, isoform A (0.0) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-3 isoform 1 (6e-108) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 8 isoform 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 8 isoform 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0005887 integral to plasma membrane GO:0006811 ion transport GO:0045211 postsynaptic membrane |
| InterPro families | IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR006201 Neurotransmitter-gated ion-channel IPR002394 Nicotinic acetylcholine receptor IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding |
| Orthology group | MCL13153 |
Nucleotide sequence:
ATGGAGGTGAATTTGAAGAACCAGGTCATGACAACCAACTTGTGGGTGGAACAGAAATGG
TTCGACTACAAGCTTCAATGGAATCCAGATGACTATGGAGGTGTTGAGATGCTGTATGTA
CCTTCAGAGCATATCTGGCTGCCTGATATCGTCCTTTATAATAACTGGGACGGTAATTAC
GAAGTCACACTTATGACAAAAGCCACTTTAAAGTATACCGGAGAAGTGAATTGGAAGCCT
CCAGCAATATACAAGTCCTCGTGTGAGATAAATGTTGAATATTTTCCATTCGATGAGCAG
ACTTGCTTTATGAAATTCGGTTCTTGGACCTACAACGGAGCTCAGGTGGATTTAAAACAT
ATGGACCAGTTACCTGGGAGTAGTCTCGTTCATGTTGGTATCGATCTTAGTGAGTTTTAT
TTATCGGTAGAGTGGGATATACTCGAGGTGCCCGCTACTAGAAATGAGGAGTACTATCCT
TGCTGTCCCGAACCATTTTCTGACATAACTTTTAAACTAACTATGAGAAGAAAAACTCTG
TTCTATACAGTAAACTTAATCATACCCTGTGTTGGGTTGACATTTTTGACTGTGCTTGTA
TTTTATTTGCCATCGGATTCTGGTGAAAAGATTTCGTTAAGCATCTCGATTCTGGTTTCA
CTCACCGTGTTTTTCCTGTTGATGGCTGAAATCATACCGCCCACATCTCTAGCAATACCG
TTGTTAGGGAAGTATTTGCTGTTTACAATGATTTTGGTATCGCTCAGTGTATGGATGACG
GTATGCGTTTTAAATGTTCACTTTAGGTCTCCTTCGACCCACACGATGTCTCCATGGATG
AAGAAGCTTTTCCTTCAGCTGATGCCTAAATTGTTGATGATGAGAAGAACCAAATACTCC
CTTCCAGACTACGACGACACGTTTGTCTCTAACGGATATACAAATGAGCTGGAAATGAGT
AGGGACAGTCTGACTGATGCTTATGGAAGCACCAAGGGCGATGATGGTGACTACTGCAAA
TCACCAGCTCCTGAGGATGATATGATGGGAGCTGGCGTTCATCAGAGACCTTCAGTAACG
GAATCGGAAAATATGCTGCCTCGTCATTTATCACCGGAAGTGGCGGCAGCGCTGCAAAGC
GTGAGATTCATAGCACAGCACATCAAAGACGCCGACAAGGATAACGAGGTTGTGGAAGAC
TGGAAGTTTATGTCTATGGTGTTGGACCGCTTCTTTCTGTGGCTGTTCACCATCGCCTGT
TTTGTGGGCACCTTCGGAATTATCTTCCAATCACCGTCACTTTACGACACCAGGGTGCCA
GTGGACCAACAGATATCGTCAATACCTATGCGAAAGAACAATTTCTTCTACCCTAAGGAT
ATTGAAACTATTGGTATAGTTAGTTAA
Protein sequence:
MEVNLKNQVMTTNLWVEQKWFDYKLQWNPDDYGGVEMLYVPSEHIWLPDIVLYNNWDGNY
EVTLMTKATLKYTGEVNWKPPAIYKSSCEINVEYFPFDEQTCFMKFGSWTYNGAQVDLKH
MDQLPGSSLVHVGIDLSEFYLSVEWDILEVPATRNEEYYPCCPEPFSDITFKLTMRRKTL
FYTVNLIIPCVGLTFLTVLVFYLPSDSGEKISLSISILVSLTVFFLLMAEIIPPTSLAIP
LLGKYLLFTMILVSLSVWMTVCVLNVHFRSPSTHTMSPWMKKLFLQLMPKLLMMRRTKYS
LPDYDDTFVSNGYTNELEMSRDSLTDAYGSTKGDDGDYCKSPAPEDDMMGAGVHQRPSVT
ESENMLPRHLSPEVAAALQSVRFIAQHIKDADKDNEVVEDWKFMSMVLDRFFLWLFTIAC
FVGTFGIIFQSPSLYDTRVPVDQQISSIPMRKNNFFYPKDIETIGIVS