New model in OGS2.0 | DPOGS204489  |
---|---|
Genomic Position | scaffold109:- 84283-107152 |
See gene structure | |
CDS Length | 582 |
Paired RNAseq reads   | 44 |
Single RNAseq reads   | 259 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007832 (2e-10) |
Best Drosophila hit   | sickie, isoform B (1e-13) |
Best Human hit | ND |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC016081 [Tribolium castaneum] (5e-36) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC016081 [Tribolium castaneum] (1e-22) |
GeneOntology terms    | GO:0005575 cellular_component GO:0017111 nucleoside-triphosphatase activity GO:0005524 ATP binding GO:0050829 defense response to Gram-negative bacterium |
InterPro families   | IPR001715 Calponin homology domain |
Orthology group | MCL19665 |
Nucleotide sequence:
ATGATACCGACTTGCATCAGAGCCCCTCGGTCCATTCAGGGCTCTACTGATGACGTCACA
CGGCAGACGAGGTCCATTGTTCAGATTTACACTGACTGGGCCAATCACTACCTGGAACGA
GCCAGATCACGGCGTAGAGTGGGCACTTCTGGAGGAGGCCTAGCTAGAGACTGCGCTGAT
GGCCTACTTTTGGCCGATGTTTTAGAAGGAGTAACAGGTCTCAAGGTGCCACGTGCTCAT
CGAAAGCCAAGAAATCCACAACAAATGTTGGAGAACGTGCAGTGTTGTTTGGACTTTCTA
CATACACAAAAAGTCCAGGGCTTAGAACAAGTAACAGCTGTTGACATACGAGACGCGAAA
TTAAAAGCTGTGTTAGCTTTATTTTTTGCTCTGAGTCGACATAAACAAGCTTCAAAACAA
CGAACGCCATCTACCGGCAATGCAACAAACGTGGGGAGAAGTTCAAGCGAAGACGTGTCT
TTGAGTTCCGTCCAACGCATAACAGGTGGCAGCAGCTGCGATGAAATATTGACTGCTTGC
GGAAATAACATCGACATGACGACTTTAACAGCTAATAGGTAA
Protein sequence:
MIPTCIRAPRSIQGSTDDVTRQTRSIVQIYTDWANHYLERARSRRRVGTSGGGLARDCAD
GLLLADVLEGVTGLKVPRAHRKPRNPQQMLENVQCCLDFLHTQKVQGLEQVTAVDIRDAK
LKAVLALFFALSRHKQASKQRTPSTGNATNVGRSSSEDVSLSSVQRITGGSSCDEILTAC
GNNIDMTTLTANR