| New model in OGS2.0 | DPOGS214810 |
|---|---|
| Genomic Position | scaffold806:- 36224-36723 |
| See gene structure | |
| CDS Length | 267 |
| Paired RNAseq reads | 11 |
| Single RNAseq reads | 836 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012045 (7e-37) |
| Best Drosophila hit | developmental embryonic B (2e-31) |
| Best Human hit | small nuclear ribonucleoprotein F (4e-28) |
| Best NR hit (blastp) | small nuclear ribonucleoprotein protein F [Bombyx mori] (3e-36) |
| Best NR hit (blastx) | small nuclear ribonucleoprotein protein F [Bombyx mori] (8e-36) |
| GeneOntology terms | GO:0030532 small nuclear ribonucleoprotein complex GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0007052 mitotic spindle organization GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR016487 Small nuclear ribonucleoprotein SmF IPR001163 Like-Sm ribonucleoprotein (LSM) domain |
| Orthology group | MCL15710 |
Nucleotide sequence:
ATGGCGGCGTCAATGCCTATAAATCCTAAGCCCTTTTTAAATAGCCTAACAGGAAAGGCT
GTATTAGTCAAATTAAAATGGGGACATGAATATAAAGGACTTTTAGTGTCTGCCGACGGT
TATATGAATTTGCAGTTAGCAAATACAGAAGAGATTGTCGATGGCTCTTGCACAGGTAAT
TTGGGAGAAGTTTTAATTAGGTGTAATAATGTGCTGTATGTAAGAGGTGCCGAGGAAGAA
GATGAGGAAGGAGAAATGAAAGAATAA
Protein sequence:
MAASMPINPKPFLNSLTGKAVLVKLKWGHEYKGLLVSADGYMNLQLANTEEIVDGSCTGN
LGEVLIRCNNVLYVRGAEEEDEEGEMKE