| New model in OGS2.0 | DPOGS203391 |
|---|---|
| Genomic Position | scaffold6:+ 711558-712322 |
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 5 |
| Single RNAseq reads | 29 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002052 (3e-67) |
| Best Drosophila hit | CG3731, isoform B (7e-47) |
| Best Human hit | cytochrome b-c1 complex subunit 1, mitochondrial precursor (2e-46) |
| Best NR hit (blastp) | ubiquinol-cytochrome c reductase core protein I [Xenopus laevis] (4e-55) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_287788 [Branchiostoma floridae] (5e-54) |
| GeneOntology terms | GO:0003824 catalytic activity GO:0004222 metalloendopeptidase activity GO:0005515 protein binding GO:0005739 mitochondrion GO:0005743 mitochondrial inner membrane GO:0005750 mitochondrial respiratory chain complex III GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c GO:0006508 proteolysis GO:0006810 transport GO:0008150 biological_process GO:0008270 zinc ion binding GO:0014823 response to activity GO:0016020 membrane GO:0022900 electron transport chain GO:0032403 protein complex binding GO:0043279 response to alkaloid GO:0046872 metal ion binding GO:0070469 respiratory chain |
| InterPro families | IPR011249 Metalloenzyme, LuxS/M16 peptidase-like, metal-binding IPR011237 Peptidase M16, core IPR007863 Peptidase M16, C-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGTTTATTCCACAAAGAACTGTATTAGCTGCCGTTGGTGGTGTCACTCACGATACGATG
GTGAACATTGGGAATAAATATTTTAGGAAAACTAAAGACCCCAAATGTATCTTTTTAGGC
CCTTGTAGATATACAGGATCCGAAATATCCTACAGAGATGATTCAATGCCCATGGGGCAT
GTAGCGATAGCTGTGGAAGGCCCTCCCTTTTCCAGTAAAGATAAAATCTTTATGGATCTA
GCTGCCTCATACATAGGGGGTTGGGACACCTCTCAACCTGGCGGAACAAACCACGGAACT
TACACCGCATTGATGGGCTCAGCAGGACGTAATTGCGAGTCTTATAAAACTTTCCAATTT
GTCTATAACGACACCAGTCTATGGGGAGCACAATTTATATCACCGAGAATTGATTTAGAC
GACATGTTATACATCATTCAGGACACTTGGATGAGATTATGTGACTTGATTACTGACGGT
GAACTAATAAGGCCCAAAAGTGAATTAAAATCAAAGATTTTGATGCAAAATCAAAGTACA
GAAAAAGCTTGTCACGATATCGGACAACACCTACTGCGAACTGGCAATCGACCGACTATT
GCTGATAGATTTCGTGAAATTGATAATATAACTGCTAAGCAGTTAAAAAAGGTTTGCGAT
AAATACATATATGATAGATGTCCAGTGGTAGTGGGAATTGGTTCCATAGAATGCTTATAT
CCGTATACAAATGTAAGAGATGCCATGCGTTGGCTAAGAGTGTAA
Protein sequence:
MFIPQRTVLAAVGGVTHDTMVNIGNKYFRKTKDPKCIFLGPCRYTGSEISYRDDSMPMGH
VAIAVEGPPFSSKDKIFMDLAASYIGGWDTSQPGGTNHGTYTALMGSAGRNCESYKTFQF
VYNDTSLWGAQFISPRIDLDDMLYIIQDTWMRLCDLITDGELIRPKSELKSKILMQNQST
EKACHDIGQHLLRTGNRPTIADRFREIDNITAKQLKKVCDKYIYDRCPVVVGIGSIECLY
PYTNVRDAMRWLRV