| New model in OGS2.0 | DPOGS208233 |
|---|---|
| Genomic Position | scaffold287:- 60319-64465 |
| See gene structure | |
| CDS Length | 1752 |
| Paired RNAseq reads | 1028 |
| Single RNAseq reads | 3132 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006424 (0.0) |
| Best Drosophila hit | CG5706 (0.0) |
| Best Human hit | phenylalanyl-tRNA synthetase beta chain (0.0) |
| Best NR hit (blastp) | phenylalanyl-tRNA synthetase beta subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | phenylalanyl-tRNA synthetase beta subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006432 phenylalanyl-tRNA aminoacylation GO:0009328 phenylalanine-tRNA ligase complex GO:0004826 phenylalanine-tRNA ligase activity GO:0000287 magnesium ion binding GO:0005524 ATP binding GO:0003723 RNA binding |
| InterPro families | IPR004531 Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic IPR005146 B3/B4 tRNA-binding domain IPR005147 tRNA synthetase, B5 IPR009061 DNA binding domain, putative IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 |
| Orthology group | MCL15698 |
Nucleotide sequence:
ATGCCGACAATATCTGTAAAACGTGATGTACTTTTCGCAGCCTTGGGAAAATCTTACACT
GATGAGGAATTCCAAGATGTGTGTTTTGAATTTGGCCTGGAATTAGACGAAGTGACCACA
GAGAAACAGATGTTGATAAAGGAGCAGGGTGATCAAGCGGGTGCTGGGGTTTCAGAGGAG
GTATTATATCGAATTGATATTCCAGCTAATAGATATGATTTGCTGTGCCTTGAGGGACTT
GTTAATGGTATACTTGTATTTCAGGGCAAGAAATCCCCACCAATATTTAAGTTAAAAAAG
TATGAAGATTGCTACTCCCTCCATTTAACACCAGCTACAGCTCAAATCAGGCCATATGCT
GTAGCAGCTGTACTTAAAGGAATATCTTTCACAAAGACAAGCTATGACAGCTTCATAGAA
TTACAGGATAAATTACATCAAAACATCTGTAGAAAACGAACACTAGTGGCCATCGGCACA
CATGATCTGGATACTATTCAGGGACCATTTGTGTATGATGCACTGCCACCGAATGATATT
AAATTCAAAGCTCTCAATCAAACAAAGGAGATGACTGCTCCCGAATTAATGGAATTATAC
TCTACTCATGCTCAACTTAAACAATATCTTAATATTATAAGAGACAGTCCCGTGTATCCT
GTTATTAAGGATAAAAATGGTGTTGTGCTGTCGATGCCTCCTATCATCAATGGAGATCAC
TCCAAGATCACACTCAACACTAAGAACGTTTTCATTGAGTGTACTGCCACTGATCTCACA
AAGGCGATAGTAGTATTGGATACTATTGTGTGTATGTTCTCTGAGTACTGTTCTAATAAA
TATGAAATACAACAATGCAAAGTATTCTCACCCGATGGGACTTATGAGTTATATCCCCAG
CTGGAATATAGGGACGAAGTTATAAGTGTTGAGAAAGCTAACAAATATATAGGGATTAGC
GAGTCCAGCGAAGTTCTATCTTCTCTCCTCTCCCGCATGTGTCTCTCGTCTCGTCCGTGC
GGCGACCGGCTGACGGTCCGCGTACCCCCCACCAGGCATGACGTCATACACGCCTGCGAC
CTCTACGAAGACATCGCCATCGCTTATGGCTATAACAACATCCCTCGTCGTCCGTCCCGC
GTCGTGTCCTGCGGAGCTCAAGAGCCGCTCAGTAAACTTACAGAGCAACTGCGCCACGCG
TGCGCTTGTGCCGGGTACACTGAAGCTCTCACCTTCACACTCTGTTCTCGTGAAGATGTA
TCAACAAAACTTGGTTACAAAATAGAAGATATTCCAGCGGTTCATATTTCAAATCCCAAA
ACATTGGAGTTCCAAGTAGTGAGGACGTTGTTGTTACCTGGACTGCTTAAAACCCTCGCT
GCCAATAAGAAGATGCCCTTACCGTTGAAGCTGTTTGAGATTAGTGACGTCGTCATCAAA
GATGAGAAGGAGGAGACGGGCGCCCGTAATGAACGTCGCCTATGCGGCGTGTACTGCGGC
AAGGCTGGTGGCTTTCAGTTCGTTCACGGATTCCTTGACAGGTTGCTGTCTTCACTGAGG
GTGGCGCATAAAGAAGATTACTATCTAAAGCCCTGTCAAGACCCGACGTATTTCCCCGGA
CGTTGTGCTGAGGTCGTACTGAAAGGTCAAGTCATCGGCAAAATAGGTGTCATCCATCCT
AATGTATTGTCAGCATTCGAACTTACCAACCCATGCTCCGCTGTGGAAATTAACATTGAA
CCTTTCTTGTGA
Protein sequence:
MPTISVKRDVLFAALGKSYTDEEFQDVCFEFGLELDEVTTEKQMLIKEQGDQAGAGVSEE
VLYRIDIPANRYDLLCLEGLVNGILVFQGKKSPPIFKLKKYEDCYSLHLTPATAQIRPYA
VAAVLKGISFTKTSYDSFIELQDKLHQNICRKRTLVAIGTHDLDTIQGPFVYDALPPNDI
KFKALNQTKEMTAPELMELYSTHAQLKQYLNIIRDSPVYPVIKDKNGVVLSMPPIINGDH
SKITLNTKNVFIECTATDLTKAIVVLDTIVCMFSEYCSNKYEIQQCKVFSPDGTYELYPQ
LEYRDEVISVEKANKYIGISESSEVLSSLLSRMCLSSRPCGDRLTVRVPPTRHDVIHACD
LYEDIAIAYGYNNIPRRPSRVVSCGAQEPLSKLTEQLRHACACAGYTEALTFTLCSREDV
STKLGYKIEDIPAVHISNPKTLEFQVVRTLLLPGLLKTLAANKKMPLPLKLFEISDVVIK
DEKEETGARNERRLCGVYCGKAGGFQFVHGFLDRLLSSLRVAHKEDYYLKPCQDPTYFPG
RCAEVVLKGQVIGKIGVIHPNVLSAFELTNPCSAVEINIEPFL