| New model in OGS2.0 | DPOGS209553 |
|---|---|
| Genomic Position | scaffold530:- 36429-46558 |
| See gene structure | |
| CDS Length | 1395 |
| Paired RNAseq reads | 27 |
| Single RNAseq reads | 72 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012446 (2e-174) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 96Aa (5e-126) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-3 isoform 1 (8e-87) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori] (0.0) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor alpha 1 subunit [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005887 integral to plasma membrane GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0016021 integral to membrane GO:0006811 ion transport GO:0045211 postsynaptic membrane |
| InterPro families | IPR006201 Neurotransmitter-gated ion-channel IPR002394 Nicotinic acetylcholine receptor IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding |
| Orthology group | MCL16058 |
Nucleotide sequence:
ATGACAACGAACGTTTGGGTAGAACAGGAATGGAATGACTACAAATTAAAATGGAACCCC
GACGATTATGGAGGAGTTGACACCCTGCACGTGCCATCAGAACACATATGGTTACCAGAC
ATCGTTTTATATAATAACGCGGATGGAAATTACGAAGTTACGATTATGACAAAAGCGATT
CTACATCACGACGGAAAAGTTGTCTGGAAACCGCCTGCCATATATAAGTCCTTTTGTGAA
ATCGACGTGGAGTACTTCCCCTTCGACGAACAAACCTGTTTCATGAAGTTCGGCTCATGG
AGCTATGATGGCTATACGGTGGACTTGAGGCACTTAAAGCAAACACCAGATTCCGATCAC
ATAGGAATGGGTATTGATTTGTCGGAATACTACATTTCTGTGGAATGGGACATAATGCGG
GTACCGGCAACGCGGAACGAAAAGTTCTACTCGTGCTGTGAAGAACCTTATCCTGATATA
ATTTTCAACCTCACACTTAGGAGGAAAACCCTCTTCTATACGGTCAATCTCATCATACCC
TGTGTTGGAATTTCATTTTTATCAGTCCTTGTCTTTTATCTGCCTTCAGATTCAGGAGAA
AAAATTTCACTTTGCATCTCTATCCTACTTTCTCTGACCGTGTTCTTTTTATTGTTAGCA
GAAATTATTCCACCCACTTCGCTCACTGTTCCTTTATTAGGAAAATATTTGCTATTTACA
ATGATGCTTGTAACATTATCGGTCGTTGTCACTATCGTGGTGCTAAACGTAAATTTTAGA
TCACCAGTAACTCACCACATGGCTCCTTGGGTACGAAAAGTCTTTATTGATTTTTTACCC
CGAATATTATGTATACAAAGGCCAGAAAAACCACCCGATGATGACGAAAATGATAAACCC
TCTGAGGTTCTTACGGACGTGTTTGGTGAAGACGACATGGATGGAAAATTTAAAGAGTGG
GGATGTGAAGAATATGAGCTACCAGGTATGCCACCGTCTCCTCCACCTCCTCCGGGAGGT
GACGATGAGTTGTTTTCCCCACCTCCAGGATCACCTTGTCGAATAGAGCTCGATGATGGT
AGTCCATCGTTTGAAAAACCTTTTGTTAGAGAAATGGAAAAAACGATAGAAGGTTCCAGA
TTTATTGCTCAGCATGTAAAAAATAAGGATAAGTTTGAAAGTGTGGAGGATGATTGGAAA
TACGTTGCCATGGTCTTGGATAGAATTTTCCTGTTTGCGTTTACGATAGCTTGTGTACTG
GGAACGGCGCTCATTATATTTAGGGCGCCAACATTTTATGATAACACAAAGCCCATCGAT
ATTCTGTACTCGAAAATTGCTAAGAAAAAGTTGGAGCTACTTAAAATGGGTTCCGAGGGT
GACCCGGGTCTCTGA
Protein sequence:
MTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAI
LHHDGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWSYDGYTVDLRHLKQTPDSDH
IGMGIDLSEYYISVEWDIMRVPATRNEKFYSCCEEPYPDIIFNLTLRRKTLFYTVNLIIP
CVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFT
MMLVTLSVVVTIVVLNVNFRSPVTHHMAPWVRKVFIDFLPRILCIQRPEKPPDDDENDKP
SEVLTDVFGEDDMDGKFKEWGCEEYELPGMPPSPPPPPGGDDELFSPPPGSPCRIELDDG
SPSFEKPFVREMEKTIEGSRFIAQHVKNKDKFESVEDDWKYVAMVLDRIFLFAFTIACVL
GTALIIFRAPTFYDNTKPIDILYSKIAKKKLELLKMGSEGDPGL