| New model in OGS2.0 | DPOGS202201 |
|---|---|
| Genomic Position | scaffold121:- 39823-40753 |
| See gene structure | |
| CDS Length | 576 |
| Paired RNAseq reads | 373 |
| Single RNAseq reads | 1330 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013513 (8e-54) |
| Best Drosophila hit | mitochondrial ribosomal protein S11 (3e-37) |
| Best Human hit | 28S ribosomal protein S11, mitochondrial isoform a (2e-13) |
| Best NR hit (blastp) | GK13384 [Drosophila willistoni] (8e-58) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP003644-PA [Tribolium castaneum] (1e-40) |
| GeneOntology terms | GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0005763 mitochondrial small ribosomal subunit |
| InterPro families | IPR001971 Ribosomal protein S11 |
| Orthology group | MCL15587 |
Nucleotide sequence:
ATGTTTACAATTCTAAGAAATACCTTAAGGCTTTCTATAAACAATCTAGTTCGACCTTTT
AATACAACAACACCTACAGCTACTGAAAAATTTGACCATAAAAGAATTCCCGCAGACGAC
GAGGGAGTGCAGGGAGAGAAGATTGTTGATATAGATTCAGTTTTACAAACAAAACAAAAT
TTATTCCCAACGGCAGATTCGGATAATCTTCTTTTTGATGGTGTACCCTACAAAGACCTG
GCAATATGTAACGTCAGAGTGAGTCACAACAACACCATCTTCACAATTACTGATGCTGAA
GGGAAAGTTAAGCTTCTACGATCCTGTGGTATTGAAGGTTTCAAAAACACTAAAAAAGGC
ACCAACATCGCTGCTCAGACGACTGCTATTAATATAGCCAATAAAGCAATCGAAAAGGGA
TTTAGAACCATAAGAGTTCGAGTGAGAGGCCTGGGACCGGGGAGATTGTCAGCGGTCAAA
GGATTACAGATGGGAGGACTTCAAATAGTCTCTGTGACAGATAATACAAGGGTGTCATGG
AACCCACCGCGACCCCGCAAGGCGAAACGATTGTAG
Protein sequence:
MFTILRNTLRLSINNLVRPFNTTTPTATEKFDHKRIPADDEGVQGEKIVDIDSVLQTKQN
LFPTADSDNLLFDGVPYKDLAICNVRVSHNNTIFTITDAEGKVKLLRSCGIEGFKNTKKG
TNIAAQTTAINIANKAIEKGFRTIRVRVRGLGPGRLSAVKGLQMGGLQIVSVTDNTRVSW
NPPRPRKAKRL