| New model in OGS2.0 | DPOGS215212 |
|---|---|
| Genomic Position | scaffold6350:- 8658-12701 |
| See gene structure | |
| CDS Length | 1071 |
| Paired RNAseq reads | 449 |
| Single RNAseq reads | 1170 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008718 (1e-95) |
| Best Drosophila hit | CG5147 (2e-22) |
| Best Human hit | DNA-directed RNA polymerase III subunit RPC4 (5e-17) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL008794 [Aedes aegypti] (2e-42) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL008794 [Aedes aegypti] (3e-37) |
| GeneOntology terms | GO:0005666 DNA-directed RNA polymerase III complex GO:0006383 transcription from RNA polymerase III promoter GO:0003899 DNA-directed RNA polymerase activity GO:0003677 DNA binding |
| InterPro families | IPR007811 RNA polymerase III Rpc4 |
| Orthology group | MCL13924 |
Nucleotide sequence:
ATGTCCAATTCCGGTGACAAACCAAACGCAAATGGTGTCAACACGGATCCTCTACAGAGA
CTAGCTTCGTTTAAGGCCCCAAGAGACCTATCACTAGGTGGATTAAAGCCAAATAAAAAA
ATCTTCACTCCAAACTTAAATGTAACTAGGAATAAAAATAAAGGTGCTTCGTCAACAAGT
AATCGTGATTCTAAAAAAGATGAGAGAAACAGACGGGATCGCAAGAACGATAAAAATAAG
AACTTCAAAAACGGACCAAATATTATAAAGTCCAGCGGAGTATTCTCTGAAGGTCTGGGT
AGTGCTGAACGACATCACTCCAGTAGGGTGTCCTATGGACGTGACGTTGATTCCTCACAC
ACTCTCCAAAAACCTACACTAAGGGTCAAGGATGTAGTAAAGATAGATAAAGAGTTGGAG
GAACAGAAAATCCAAGAGGCTTTTGGTGAGAACAATGCTTTTGATGATGAAGGAGAAGAC
TTCAAACAGGTGTTGGACATTGAAGCTCCTATCAAGTTACCCATGGACGACGGAAGCATT
AAGCAATTAAAAGCCGCTGTGAAGATAAAAAATGAGGTGATAGTGAAACAGGAGCCGAGC
GAGGAAGCATCTACGGCTGTGTTGGAACAGAAGCCCTTGGCTGATGTGAAGGAAGTGTAT
GAAGATTCGAGTGTTATGAACCTGTTGCGGAGTGACAAACCAACACTCATATTGTTACAG
TTAGCCGACTCCCTGCCGGGCAGAGGTGGTGCTAGTGATGATAGGAAACATGAGCCTGGG
ACGTCTGAGGCTGCGGAACAAGAAACTGATAGCAGATGTCACCTGACTGATCTCGAGGAA
GGAAGAATAGGGAAGATGAGGATACACAGGTCCGGCAGGGTCACCATGGCCTTAGGAGAT
ACGATATTTGAGGTGAGTGCTGGCACTAAAGCCTCCTTCCACCAGGAGGTCGTGTCGGTA
GGAGTGGATGAAGCGTCCCGTTCCGCGAGCCTGGTCTCCTTGGGTCCCCTTCATCACAAA
CTGAACATAACACCGCACTGGCAGTCAATGTTCAATAAAATGTCCGTGTGA
Protein sequence:
MSNSGDKPNANGVNTDPLQRLASFKAPRDLSLGGLKPNKKIFTPNLNVTRNKNKGASSTS
NRDSKKDERNRRDRKNDKNKNFKNGPNIIKSSGVFSEGLGSAERHHSSRVSYGRDVDSSH
TLQKPTLRVKDVVKIDKELEEQKIQEAFGENNAFDDEGEDFKQVLDIEAPIKLPMDDGSI
KQLKAAVKIKNEVIVKQEPSEEASTAVLEQKPLADVKEVYEDSSVMNLLRSDKPTLILLQ
LADSLPGRGGASDDRKHEPGTSEAAEQETDSRCHLTDLEEGRIGKMRIHRSGRVTMALGD
TIFEVSAGTKASFHQEVVSVGVDEASRSASLVSLGPLHHKLNITPHWQSMFNKMSV