| New model in OGS2.0 | DPOGS207772 |
|---|---|
| Genomic Position | scaffold770:+ 17160-18349 |
| See gene structure | |
| CDS Length | 552 |
| Paired RNAseq reads | 721 |
| Single RNAseq reads | 3197 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005328 (1e-68) |
| Best Drosophila hit | CG5885 (4e-56) |
| Best Human hit | translocon-associated protein subunit gamma (1e-51) |
| Best NR hit (blastp) | translocon-associated protein gamma isoform 1 [Bombyx mori] (1e-92) |
| Best NR hit (blastx) | translocon-associated protein gamma isoform 1 [Bombyx mori] (3e-71) |
| GeneOntology terms | GO:0016021 integral to membrane GO:0005784 Sec61 translocon complex GO:0005786 signal recognition particle, endoplasmic reticulum targeting GO:0006613 cotranslational protein targeting to membrane GO:0030176 integral to endoplasmic reticulum membrane GO:0005811 lipid particle |
| InterPro families | IPR009779 Translocon-associated, gamma subunit |
| Orthology group | MCL13984 |
Nucleotide sequence:
ATGTCAGGAAAGGCAAACAAAGCTTTTACGAAGGAGGAAGAGTTGCTGCTACAGGATTTT
AGTAGAAATGTATCTACGAAATCTTCTGCCTTATTTTATGGAAATGCATTCATCGTTTCT
GCTATACCTATATGGCTGTTCTGGAGAGTTCACGCTTTAGAAGTAAGCTCATCATTGGCT
TGGTTTGCTATAGTTACCGTGGCCAGCACTTGGTTGCTTGCTTTAGCTTACCGTAATACC
AAGTTCCAATTGAAACACCGTGTCGCTGTACGTCGTGAAGATGCCGTCGCTCGTGAGATG
GCTAGAAAGTTGGCTGATGAAAAGAAAATGAGCAGGAAGGAGAAGGATGAAAGAATTTTA
TGGAAAAAGAATGAAGTTGCTGACTATGAAGCAACAACTTTCTCAATATTTTACAACAAT
GCTCTATTCTTGACTATTGTTATCCTCGCCAGCTTCTATCTCCTGCGTTCATTCACACCC
ACCGTTAACTACATTGTATCCCTCACAGTTGCCTCAGGACTTCTGGCTCTTCTGTCTACC
GGCTCTAAGTGA
Protein sequence:
MSGKANKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSSLA
WFAIVTVASTWLLALAYRNTKFQLKHRVAVRREDAVAREMARKLADEKKMSRKEKDERIL
WKKNEVADYEATTFSIFYNNALFLTIVILASFYLLRSFTPTVNYIVSLTVASGLLALLST
GSK