| New model in OGS2.0 | DPOGS210276 |
|---|---|
| Genomic Position | scaffold1827:+ 8198-8841 |
| See gene structure | |
| CDS Length | 471 |
| Paired RNAseq reads | 544 |
| Single RNAseq reads | 1351 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000029 (1e-64) |
| Best Drosophila hit | NHP2 (2e-37) |
| Best Human hit | H/ACA ribonucleoprotein complex subunit 2 isoform a (8e-23) |
| Best NR hit (blastp) | nucleolar protein family A member 2 [Bombyx mori] (3e-78) |
| Best NR hit (blastx) | nucleolar protein family A member 2 [Bombyx mori] (9e-67) |
| GeneOntology terms | GO:0005730 nucleolus GO:0031118 rRNA pseudouridine synthesis GO:0030559 rRNA pseudouridylation guide activity GO:0005732 small nucleolar ribonucleoprotein complex GO:0006364 rRNA processing GO:0030515 snoRNA binding |
| InterPro families | IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 |
| Orthology group | MCL13929 |
Nucleotide sequence:
ATGGGAAAAGTAAAACAAGAACCAGTGGAACAGGAAGAGGCAGGAGACGTAAGCATCAAG
TCTGAACCACAAAGTTACGATGAGAAAGTCGAACACTGCAGTGTTATAGCTAAGCCGATG
GCGTCAAAGAAACTTAGTAAAAAGATTTACAAACTCATAAAAAAATCCAGTAGCCATAAG
AATTATATAAGAAACGGGTTAAAAATTGTCCAGAAACAATTGCGTCTTGGAGAAAAAGGT
ATTGTTGTATTTGCTGGTGATATCTCGCCAATTGAGATCATGTGCCACTTGCCTGCTGTT
TGTGAAGAGAAAGACGTCCCCTATTGTTACACACCAAGCCGTAAGGACATAGGATCAGCC
ATGGGCACCATGAGAGGATGCATTATGGTACTCGTAAAGGAACATGAAGAGTATAAAGAT
TTATATGAAGAAGTAAAAAGCGAAATTAAATTACTTGGACATCCATTATAG
Protein sequence:
MGKVKQEPVEQEEAGDVSIKSEPQSYDEKVEHCSVIAKPMASKKLSKKIYKLIKKSSSHK
NYIRNGLKIVQKQLRLGEKGIVVFAGDISPIEIMCHLPAVCEEKDVPYCYTPSRKDIGSA
MGTMRGCIMVLVKEHEEYKDLYEEVKSEIKLLGHPL