DPOGS200129 | ||
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Transcript | DPOGS200129-TA | 417 bp |
Protein | DPOGS200129-PA | 138 aa |
Genomic position | DPSCF302324 + 85-646 | |
RNAseq coverage | 1408x (Rank: top 9%) |
Annotation | ||||
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Heliconius | HMEL011973 | 9e-60 | 79.41% |   |
Bombyx | BGIBMGA007494-TA | 2e-51 | 66.18% |   |
Drosophila | Mdr50-PA | 1e-39 | 51.45% |   |
EBI UniRef50 | UniRef50_E9LP50 | 7e-52 | 69.85% | ATP-binding cassette sub-family B member 1 n=4 Tax=Obtectomera RepID=E9LP50_TRINI |
NCBI RefSeq | XP_002033817.1 | 2e-38 | 51.45% | GM21523 [Drosophila sechellia] |
NCBI nr blastp | gi|319894762 | 3e-51 | 69.85% | ATP-binding cassette sub-family B member 1 [Trichoplusia ni] |
NCBI nr blastx | gi|319894762 | 6e-49 | 69.85% | ATP-binding cassette sub-family B member 1 [Trichoplusia ni] |
Group | ||||
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Gene Ontology | GO:0006810 | 4.5e-26 | transport | |
GO:0055085 | 4.5e-26 | transmembrane transport | ||
GO:0005524 | 4.5e-26 | ATP binding | ||
GO:0042626 | 4.5e-26 | ATPase activity, coupled to transmembrane movement of substances | ||
GO:0016021 | 4.5e-26 | integral to membrane | ||
KEGG pathway | dse:Dsec_GM21523 | 5e-38 |   | |
  | K05658 (ABCB1) | maps-> | ABC transporters | |
InterPro domain | [1-137] IPR011527 | 4.5e-26 | ABC transporter, transmembrane domain, type 1 | |
[2-124] IPR001140 | 1.9e-24 | ABC transporter, transmembrane domain | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200129-TA
ATGGTGGTTGGAATATTCGCAGGACTAACGAACCTTATTATGGTATTTATGTACGGTGTTGCTGGAGGACATTTAACATGTAGGTTAAGAAAATTATTATTTGAACATATGCTTCAACAAGAAATCGGATTTTTTGATGACAAAAATAATTCGACGGGAGCTCTTTGTGCTCGACTATCAGGAGAAGCTGCAGCAGTTCAAGGGGCTACAGGTCACAGAATAGGAACAGTTTTACAAGCCTTCGGAACCCTTTCTTTCGCGTTGGTAGCCTCGCTATACTATGAATGGCGGCTAGGTTTAGTTGCTCTAGCATTTGTTCCTATTATGGGACTCATGGTTTATAAACAGGGCAAAATGACAACTAGGCATTCGTATGGAACAGCTAAAACAATGGAAAAGAGTTCTAAGGTTAGTTAA
>DPOGS200129-PA
MVVGIFAGLTNLIMVFMYGVAGGHLTCRLRKLLFEHMLQQEIGFFDDKNNSTGALCARLSGEAAAVQGATGHRIGTVLQAFGTLSFALVASLYYEWRLGLVALAFVPIMGLMVYKQGKMTTRHSYGTAKTMEKSSKVS-