DPOGS200498 | ||
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Transcript | DPOGS200498-TA | 444 bp |
Protein | DPOGS200498-PA | 147 aa |
Genomic position | DPSCF300158 + 251455-253048 | |
RNAseq coverage | 7818x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL005107 | 3e-83 | 95.42% |   |
Bombyx | BGIBMGA010541-TA | 1e-55 | 96.19% |   |
Drosophila | eff-PA | 2e-82 | 97.28% |   |
EBI UniRef50 | UniRef50_Q9Y2X8 | 3e-75 | 90.48% | Ubiquitin-conjugating enzyme E2 D4 n=366 Tax=root RepID=UB2D4_HUMAN |
NCBI RefSeq | XP_001605481.1 | 4e-81 | 97.28% | PREDICTED: similar to ubiquitin-conjugating enzyme [Nasonia vitripennis] |
NCBI nr blastp | gi|24646906 | 8e-80 | 97.28% | effete [Drosophila melanogaster] |
NCBI nr blastx | gi|24646906 | 2e-81 | 97.28% | effete [Drosophila melanogaster] |
Group | ||||
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Gene Ontology | GO:0016881 | 5.3e-52 | acid-amino acid ligase activity | |
KEGG pathway | api:100145836 | 1e-80 |   | |
  | K06689 (UBE2D_E, UBC4, UBC5) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | Protein processing in endoplasmic reticulum | |
InterPro domain | [1-147] IPR016135 | 8.7e-79 | Ubiquitin-conjugating enzyme/RWD-like | |
[5-141] IPR000608 | 5.3e-52 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL11048 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200498-TA
ATGGCGTTAAAACGAATTAATAGGGAATTACAAGATCTGGGTCGAGACCCCCCAGCACAATGTTCCGCAGGACCACACGGGGAAGATCTATTCCACTGGCAGGCCACAATTATGGGTCCAGTGGACAGTCCTTACCAGGGTGGAGTGTTCTTTCTGACCATACATTTCCCTACAGACTATCCATTTAAACCACCAAAGGTTGCGTTCACGACACGTATCTATCACCCCAACATAAACAGTAATGGTTCCATTTGTCTTGATATCTTGCGTTCACAATGGTCGCCAGCTCTTACTATATCCAAAGTGTTGCTGTCAATTTGCTCACTGTTATGTGATCCGAACCCCGATGATCCACTGGTGCCAGAAATCGCTAGGATCTACAAAACTGACAGAGAAAAGTACAATGAATTAGCCCGAGAGTGGACAAGGAAGTATGCCATGTGA
>DPOGS200498-PA
MALKRINRELQDLGRDPPAQCSAGPHGEDLFHWQATIMGPVDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKYAM-