| DPOGS200933 | ||
|---|---|---|
| Transcript | DPOGS200933-TA | 540 bp |
| Protein | DPOGS200933-PA | 179 aa |
| Genomic position | DPSCF300301 + 152144-152836 | |
| RNAseq coverage | 249x (Rank: top 42%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL020276 | 1e-70 | 85.79% | |
| Bombyx | BGIBMGA000304-TA | 4e-41 | 67.60% | |
| Drosophila | CG5491-PA | 8e-12 | 45.71% | |
| EBI UniRef50 | UniRef50_E2BN22 | 3e-17 | 43.94% | Integrator complex subunit 12 n=5 Tax=Formicidae RepID=E2BN22_HARSA |
| NCBI RefSeq | XP_393298.3 | 1e-18 | 39.57% | PREDICTED: similar to PHD finger protein 22 [Apis mellifera] |
| NCBI nr blastp | gi|322792328 | 8e-19 | 45.11% | hypothetical protein SINV_06211 [Solenopsis invicta] |
| NCBI nr blastx | gi|91094423 | 9e-28 | 37.61% | PREDICTED: similar to AGAP004359-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 1.8e-09 | protein binding | |
| GO:0008270 | 6.6e-07 | zinc ion binding | ||
| KEGG pathway | ||||
| InterPro domain | [39-110] IPR011011 | 2.5e-13 | Zinc finger, FYVE/PHD-type | |
| [52-106] IPR013083 | 1e-10 | Zinc finger, RING/FYVE/PHD-type | ||
| [57-105] IPR019787 | 1.8e-09 | Zinc finger, PHD-finger | ||
| [56-105] IPR001965 | 6.6e-07 | Zinc finger, PHD-type | ||
| Orthology group | MCL15733 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200933-TA
ATGGAATCACCTTCGAGATCAAAGCACAAAGGTGACAAAAATGTTACGAAAACAGTTGCAATTCCACAACAGAGCCCCCAACAAATACAAATACCTGAAAGAGAGAACGATGACGGTTCCGTGATGGATGGAGATTTATCTTTCGATTTCCTACAAGAAGATTTGAATTGCGTTGTATGCAGACAAATTGCAGTTCAGGCTGGAAATCGTTTAGTGGAATGTGATGTTTGCCATGCACTTTACCATCAGGATTGTCACAAGCCTGTTATAAGTGATAATGACATGGCGTCGGGATGGAAGTGTGCATCATGTCTGTCATCTCAGTTTCCAACTGCTTTCCCAAACAAGGCTTCAGAACCAAAGTCACCCACTCAAGTCTCAGGGTCCACCACACCAGTGAAAATATCTAGCAGTAGTTCAGCTTCCTCATCCCCGTCCAAAGTGGTGACACCTAATATTAACATCATATCCGCTGATAAACGAATACAAATTATGAAGAAAAAGGCAGCTAAACAGCATGAAAAAAAGAAAAACAAATAA
>DPOGS200933-PA
MESPSRSKHKGDKNVTKTVAIPQQSPQQIQIPERENDDGSVMDGDLSFDFLQEDLNCVVCRQIAVQAGNRLVECDVCHALYHQDCHKPVISDNDMASGWKCASCLSSQFPTAFPNKASEPKSPTQVSGSTTPVKISSSSSASSSPSKVVTPNINIISADKRIQIMKKKAAKQHEKKKNK-