| DPOGS201095 | ||
|---|---|---|
| Transcript | DPOGS201095-TA | 270 bp |
| Protein | DPOGS201095-PA | 89 aa |
| Genomic position | DPSCF300185 + 345929-347382 | |
| RNAseq coverage | 4161x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007998 | 4e-23 | 62.67% | |
| Bombyx | BGIBMGA007161-TA | 1e-35 | 90.54% | |
| Drosophila | l(1)G0156-PB | 1e-28 | 72.00% | |
| EBI UniRef50 | UniRef50_B4GW56 | 1e-25 | 70.67% | GL14780 n=4 Tax=Endopterygota RepID=B4GW56_DROPE |
| NCBI RefSeq | XP_001656451.1 | 4e-29 | 74.67% | isocitrate dehydrogenase [Aedes aegypti] |
| NCBI nr blastp | gi|347968444 | 1e-27 | 72.37% | AGAP002728-PB [Anopheles gambiae str. PEST] |
| NCBI nr blastx | gi|347968444 | 1e-26 | 72.37% | AGAP002728-PB [Anopheles gambiae str. PEST] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000287 | 1.3e-40 | magnesium ion binding | |
| GO:0016616 | 1.3e-40 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | ||
| GO:0051287 | 1.3e-40 | NAD binding | ||
| GO:0055114 | 1.3e-40 | oxidation-reduction process | ||
| KEGG pathway | aag:AaeL_AAEL000454 | 1e-28 | ||
| K00030 (IDH3) | maps-> | Citrate cycle (TCA cycle) | ||
| InterPro domain | [15-90] IPR001804 | 1.3e-40 | Isocitrate/isopropylmalate dehydrogenase | |
| [14-89] IPR024084 | 9.1e-29 | Isopropylmalate dehydrogenase-like domain | ||
| Orthology group | MCL30480 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201095-TA
ATGACGAGCATCCAAACCATCACAGAATATCCAAGAAACAATGTCCACGGCACGGCCCCGGACATCGCTGGGAAGGATTTGGCCAATCCTACAGCTTTACTCCTCTCCGCTATCATGATGTTAAGGCATTTACAGCTCAACGAACACGCGGATAGAGTCCAAAACGCCTGCCACGAGGTCCTGCGCGAGGGCAAATCTCTCACCGGTGATCTCGGCGGCACAGGAAAATGCAGTGAATTCACTAACGCCATCATATCAAAATTAAAATAA
>DPOGS201095-PA
MTSIQTITEYPRNNVHGTAPDIAGKDLANPTALLLSAIMMLRHLQLNEHADRVQNACHEVLREGKSLTGDLGGTGKCSEFTNAIISKLK-