| DPOGS201421 | ||
|---|---|---|
| Transcript | DPOGS201421-TA | 1902 bp |
| Protein | DPOGS201421-PA | 633 aa |
| Genomic position | DPSCF300006 - 1628031-1632586 | |
| RNAseq coverage | 79x (Rank: top 64%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009071 | 0.0 | 63.36% | |
| Bombyx | BGIBMGA002574-TA | 0.0 | 63.83% | |
| Drosophila | CG5009-PA | 5e-173 | 48.33% | |
| EBI UniRef50 | UniRef50_Q7KML2 | 8e-171 | 48.33% | Probable peroxisomal acyl-coenzyme A oxidase 1 n=26 Tax=Neoptera RepID=ACOX1_DROME |
| NCBI RefSeq | XP_625136.1 | 0.0 | 53.39% | PREDICTED: similar to CG5009-PA, partial [Apis mellifera] |
| NCBI nr blastp | gi|332027665 | 0.0 | 53.10% | Putative peroxisomal acyl-coenzyme A oxidase 1 [Acromyrmex echinatior] |
| NCBI nr blastx | gi|307193504 | 0.0 | 53.44% | Probable peroxisomal acyl-coenzyme A oxidase 1 [Harpegnathos saltator] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003997 | 8.7e-216 | acyl-CoA oxidase activity | |
| GO:0006631 | 8.7e-216 | fatty acid metabolic process | ||
| GO:0050660 | 8.7e-216 | flavin adenine dinucleotide binding | ||
| GO:0005777 | 8.7e-216 | peroxisome | ||
| GO:0055114 | 8.7e-216 | oxidation-reduction process | ||
| GO:0016627 | 1.2e-50 | oxidoreductase activity, acting on the CH-CH group of donors | ||
| GO:0006635 | 4.3e-47 | fatty acid beta-oxidation | ||
| GO:0008152 | 1.5e-44 | metabolic process | ||
| GO:0003995 | 6.3e-43 | acyl-CoA dehydrogenase activity | ||
| KEGG pathway | ame:552757 | 0.0 | ||
| K00232 (E1.3.3.6, ACOX1, ACOX3) | maps-> | Peroxisome | ||
| Fatty acid metabolism | ||||
| Biosynthesis of unsaturated fatty acids | ||||
| PPAR signaling pathway | ||||
| alpha-Linolenic acid metabolism | ||||
| InterPro domain | [1-632] IPR012258 | 8.7e-216 | Acyl-CoA oxidase | |
| [68-597] IPR023570 | 3.9e-181 | Acyl-CoA oxidase, peroxisomal | ||
| [249-437] IPR009075 | 1.2e-50 | Acyl-CoA dehydrogenase/oxidase C-terminal | ||
| [446-628] IPR002655 | 4.3e-47 | Acyl-CoA oxidase, C-terminal | ||
| [78-244] IPR009100 | 1.5e-44 | Acyl-CoA dehydrogenase/oxidase | ||
| [111-241] IPR006091 | 6.3e-43 | Acyl-CoA oxidase/dehydrogenase, central domain | ||
| [9-105] IPR013786 | 7e-14 | Acyl-CoA dehydrogenase/oxidase, N-terminal | ||
| Orthology group | MCL10144 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201421-TA
ATGAAATGTTATCCAGTACCCAGAGAAAACTTGGTGCTGAGCATTGACAATTTAAAAGATGATATACCAGAAGAATATCTCAGCCATAAGGAATGCTATGAAAACGTTATTCGGAAGGGTTCCGTACTTTATGACATATTTTCGGAACTTTCTAAAGATCGAAAGCATAAAGCTCATCAAGCTCCATCCAACGCTTATCGTATATCCGATGGGATTATGCAGAATGTGAACCCTTTTCTTCTGCACTTCGCTCTATTTGTACCGGCCATCACCAACCAGGCCACTCCGGAACAGCAGGCGGAGTTTCTGAAACACGGGTTTGGCATCATTGGAACTTACGCTCAGACTGAACTCGGCCATGGCACGTTTTTAAGAGGGCTTGAGACGACAGCTACACTAGACTTGGAAACTGATGAGTTTGTATTGAATAGCCCGACTCTGACGTCCTATAAATGGTGGCCCGGAGGATTGGGACATACCGCCAACCACTGTGTCGTGATGGCTCAACTCTATGTCAAGGGAAAATGTCATGGACCACATTTATTCTTTGTACAAATTCGGGATATTGAAACCCACGAGCCCCTACCAGGACTTAAATTGGGTGAGATTGGAGCCAAGATGGGTTTCAACACAGCGGATAATGGTTTCCTTGGATTCCATAATTTTAGGATACCGAGAAATAATATGCTAATGAAAAATTCTCAAGTTTTAAAAGATGGCACGTACGTGGAATCCAAAAACGAAAAGTTAACTTACGGTTCTATGGTGTTTGTGAGGGTGTACCTTCTGTCCGACATGGCGTATATGTTGGCGCGAGCTGCCACCATCAGCGTCAGATACTCCGCTGTGAGGCATCAATCGCACATAAAACCTGATGAACCAGAAGTTCAAATATTAGATTTTGTGATCCAACAACATAAGCTGTTTATATCAATAGCGACCAGTCATGCTTTCAAAATATGTGGCTTATGGTTGTGGCAAACCTACTCGAAGGTCATGGAAGATATTGGCAAGGGGTCTATGGACCGTTTACCTGAATTGCATGCGCTCTCTTGCTGTCTTAAAACCACAAGTACTCGGGACGCAGGGTGGCTGATTGAGCAATGTCGGTTGGCTTGCGGCGGTCATGGCTACCTAATGTCCTCAAACCTGCCCTCGTTGTACACGACAGCGACCGCTGCTATCACTTACGAGGGAGAGTCTACTGTGCTCCTGTTACAAACTGCCAGATACTTGATAAAAAGCTGGAAACGCGCCATGGAAGGTGAATCTCTGCCAGCGACTGTTAGCTTTCTGTCAGAGTACTTTAACAAGAGGTACAATAAATGGGAAAACACACCCAAAGGAATCGTCGACGGACTTAAATTGGTAGTTGCTGGGGTAACTAAAATGTGCGCAGAGTCTATACAAAAGCATGTGTCAAGAGGGCAACAATATGAAGAAGCTTGGAATTCATCTTCTGTACAATTGATTAAAGCGAGTGAGGCATATTCCCGGGCTCTGCTTTGTGAAGTGTTTTGGTTCGAAGTCGATAAAGTTTCTTCTACGTTATCCAACAATTTGGCCGTGGTGCTTAAACAACTGGCGGAATTATACATTACTTATTGGGCTTTGGAGAAACGGGGTGATTTATTGGTATATACAACCATATCAAAAGATGATCTAGACAAACTTCAGGAGAGGTATGAGGAGTTGCTAGCCTTAATCAGACCCAACGCTGTAGGACTCGTTGATAGTTTTGACATCAGAGACGAGATTCTATGTTCAACTCTTGGTGCTTACGACGGACGGGTTTACGAAAGGATGATGGAACACGCCCTAAAAAGTCCCTTGAATGCTGAAACTGTCAATCAGAGTTTTCATAAATACATGAAACCAGTTATTCTTAAACACAAAATTTAA
>DPOGS201421-PA
MKCYPVPRENLVLSIDNLKDDIPEEYLSHKECYENVIRKGSVLYDIFSELSKDRKHKAHQAPSNAYRISDGIMQNVNPFLLHFALFVPAITNQATPEQQAEFLKHGFGIIGTYAQTELGHGTFLRGLETTATLDLETDEFVLNSPTLTSYKWWPGGLGHTANHCVVMAQLYVKGKCHGPHLFFVQIRDIETHEPLPGLKLGEIGAKMGFNTADNGFLGFHNFRIPRNNMLMKNSQVLKDGTYVESKNEKLTYGSMVFVRVYLLSDMAYMLARAATISVRYSAVRHQSHIKPDEPEVQILDFVIQQHKLFISIATSHAFKICGLWLWQTYSKVMEDIGKGSMDRLPELHALSCCLKTTSTRDAGWLIEQCRLACGGHGYLMSSNLPSLYTTATAAITYEGESTVLLLQTARYLIKSWKRAMEGESLPATVSFLSEYFNKRYNKWENTPKGIVDGLKLVVAGVTKMCAESIQKHVSRGQQYEEAWNSSSVQLIKASEAYSRALLCEVFWFEVDKVSSTLSNNLAVVLKQLAELYITYWALEKRGDLLVYTTISKDDLDKLQERYEELLALIRPNAVGLVDSFDIRDEILCSTLGAYDGRVYERMMEHALKSPLNAETVNQSFHKYMKPVILKHKI-