| DPOGS201675 | ||
|---|---|---|
| Transcript | DPOGS201675-TA | 375 bp |
| Protein | DPOGS201675-PA | 124 aa |
| Genomic position | DPSCF300103 + 426051-426732 | |
| RNAseq coverage | 3085x (Rank: top 4%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012950 | 2e-62 | 86.29% | |
| Bombyx | BGIBMGA005462-TA | 2e-60 | 86.29% | |
| Drosophila | CG7712-PA | 3e-46 | 66.67% | |
| EBI UniRef50 | UniRef50_Q7JZK1 | 5e-44 | 66.67% | CG7712 n=33 Tax=Coelomata RepID=Q7JZK1_DROME |
| NCBI RefSeq | XP_001850941.1 | 3e-48 | 71.31% | NADH dehydrogenase [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170046809 | 9e-47 | 71.31% | NADH dehydrogenase [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170046809 | 5e-45 | 71.31% | NADH dehydrogenase [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | cqu:CpipJ_CPIJ009635 | 1e-47 | ||
| K03950 (NDUFA6) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-124] IPR016488 | 9.6e-62 | NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6 | |
| [28-89] IPR008011 | 5.6e-07 | Complex 1 LYR protein | ||
| Orthology group | MCL11278 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201675-TA
ATGTCTGCAAGACAAGCCATACAAGTTGGCACTAAAACCGTTAAGCCAGTCCTTTCTGTAACTCAAGGAGAGGCGAGGTTGCGAGTGTTAAATTTGTACAAGGCTTGGTATCGTCAAATCCCGTACATAGTCAAAGATTTTGATATCCCAAAATCAGAAGAACAATGCCGTGCTAAGCTAAAGGAAATCTTTTTAAGGAACAAGGATGTGACTGATATTAGAGTTATTGATATCCTCGTTATCAAGGGACAAATGGAATTAAAAGAATCTGTCAACATCTGGAAGCAAAAGGGGCATATAATGGCATATTTCAAGCCTACTGAAGAACCTAAGCCTAAAGATTTCCTTTCAAAGTTCTTCTCGGGAGTTGAATGA
>DPOGS201675-PA
MSARQAIQVGTKTVKPVLSVTQGEARLRVLNLYKAWYRQIPYIVKDFDIPKSEEQCRAKLKEIFLRNKDVTDIRVIDILVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKDFLSKFFSGVE-