DPOGS204401 | ||
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Transcript | DPOGS204401-TA | 627 bp |
Protein | DPOGS204401-PA | 208 aa |
Genomic position | DPSCF300002 - 1055214-1055840 | |
RNAseq coverage | 1762x (Rank: top 7%) |
Annotation | ||||
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Heliconius | HMEL015683 | 2e-120 | 99.04% |   |
Bombyx | BGIBMGA007712-TA | 2e-119 | 98.08% |   |
Drosophila | Rab7-PA | 2e-98 | 79.81% |   |
EBI UniRef50 | UniRef50_P51149 | 9e-102 | 84.13% | Ras-related protein Rab-7a n=243 Tax=root RepID=RAB7A_HUMAN |
NCBI RefSeq | NP_001040368.1 | 5e-118 | 98.08% | Rab7 [Bombyx mori] |
NCBI nr blastp | gi|114051368 | 8e-117 | 98.08% | Rab7 [Bombyx mori] |
NCBI nr blastx | gi|114051368 | 3e-114 | 98.08% | Rab7 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0007264 | 6.5e-95 | small GTPase mediated signal transduction | |
GO:0005525 | 6.5e-95 | GTP binding | ||
GO:0015031 | 6.5e-95 | protein transport | ||
GO:0016020 | 2.3e-30 | membrane | ||
GO:0007165 | 2.3e-30 | signal transduction | ||
GO:0006184 | 2.3e-30 | GTP catabolic process | ||
GO:0003924 | 2.3e-30 | GTPase activity | ||
GO:0006886 | 1.3e-13 | intracellular protein transport | ||
GO:0006913 | 1.3e-13 | nucleocytoplasmic transport | ||
GO:0005622 | 3e-12 | intracellular | ||
KEGG pathway | cqu:CpipJ_CPIJ009089 | 1e-107 |   | |
  | K07897 (RAB7A) | maps-> | Amoebiasis | |
  |   |   | Endocytosis | |
  |   |   | Phagosome | |
InterPro domain | [9-176] IPR003579 | 6.5e-95 | Small GTPase superfamily, Rab type | |
[10-174] IPR001806 | 6.1e-58 | Small GTPase superfamily | ||
[6-176] IPR020849 | 2.3e-30 | Small GTPase superfamily, Ras type | ||
[10-169] IPR005225 | 3.8e-26 | Small GTP-binding protein domain | ||
[14-206] IPR002041 | 1.3e-13 | Ran GTPase | ||
[11-176] IPR003578 | 3e-12 | Small GTPase superfamily, Rho type | ||
Orthology group | MCL14862 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204401-TA
ATGTCTTCAAGAAAAAAGGTTCTTTTAAAAGTTATTATCCTAGGAGATAGCGGTGTCGGTAAAACATCCTTGATGAATCAGTTTGTCAACAAGAAATTTTCCAATCAGTACAAGGCTACAATAGGTGCTGATTTCCTCACGAAGGAAGTAATAGTTGACGATAGAATCGTCACTATGCAAATTTGGGATACGGCAGGGCAAGAGAGATTCCAATCTTTGGGGGTGGCGTTCTACCGTGGGGCGGACTGTTGCGTCTTAGTTTTTGACGTAACTGCCCCTAACACGTTTAAGTCCTTGGAAAGTTGGCGAGATGAATTTCTAATACAGGCTTCACCTCGAGATCCTGACAATTTCCCGTTTGTTATACTAGGTAATAAGGTCGATTTGGAGAACCGTGCTGTTTCTGCTAAAAGAGCCCAACAGTGGTGTCAAAGCAAAAATGATATCCCATACTTCGAAACAAGTGCCAAAGAAGCAGTTAACGTTGAGCTCGCATTCCAAACTATCGCACGTAATGCTTTAGCTCAAGAGACTGAAGCTGAGCTGTATAATGAATTCCCAGATCAAATCAAGCTAAACGCTAATGACAACGGCCGTAACAGAGATGGAGATAACTGTGCTTGCTAA
>DPOGS204401-PA
MSSRKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLENRAVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQIKLNANDNGRNRDGDNCAC-