DPOGS204444 | ||
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Transcript | DPOGS204444-TA | 657 bp |
Protein | DPOGS204444-PA | 218 aa |
Genomic position | DPSCF300002 + 45440-54170 | |
RNAseq coverage | 88x (Rank: top 63%) |
Annotation | ||||
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Heliconius | HMEL017406 | 3e-67 | 90.00% |   |
Bombyx | BGIBMGA013642-TA | 5e-78 | 78.53% |   |
Drosophila | CG31106-PB | 1e-29 | 33.16% |   |
EBI UniRef50 | UniRef50_D3TPI2 | 3e-37 | 42.35% | Synaptic vesicle transporter sVOP n=2 Tax=Diptera RepID=D3TPI2_GLOMM |
NCBI RefSeq | XP_001865146.1 | 1e-37 | 41.08% | synaptic vesicle protein [Culex quinquefasciatus] |
NCBI nr blastp | gi|37142938 | 3e-38 | 45.73% | SV2-like protein 1 [Ctenocephalides felis] |
NCBI nr blastx | gi|37142938 | 2e-38 | 45.73% | SV2-like protein 1 [Ctenocephalides felis] |
Group | ||||
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Gene Ontology | GO:0055085 | 1.2e-20 | transmembrane transport | |
GO:0016021 | 1.2e-20 | integral to membrane | ||
KEGG pathway | ame:724429 | 8e-27 |   | |
  | K06258 (SV2) | maps-> | ECM-receptor interaction | |
InterPro domain | [1-211] IPR016196 | 1.2e-34 | Major facilitator superfamily domain, general substrate transporter | |
[76-211] IPR011701 | 1.2e-20 | Major facilitator superfamily | ||
Orthology group | MCL22329 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS204444-TA
ATGGATAATAGTGATAACAGCTCGTCAGAGAGGAGCCTGGAGAGGTTGACAGAAATAAAAGCATTCATTGAGGCTAGTAAGAAAACTAATGAAAAAGCCGAAGAGCTTCAGGTCGATGCTGATAAAAGCCTGTCAAAGCTTAACGAAGTCGTCTTTGACGATGCTTTCGAATTAACCGGTCACGGCAAGTTTAATCACATAGTGCTGATGACCTGTGGTCTTATTATGCTGAACGTGTCCATGGAGTCCGTCGGCATGAGCTACGTGATCACGGCAGCTGAGTGCGAGCTTGGATTAACGTCCGAGCACAAGGGCCTGATCAATGCGGCAGCTTTCATTGGTATAATAAGCACGTCGTTCCTGTGGGGCTACCTCGGGGATCGTTGTGGAAGGCGCGCTGTTATGTTGCCAGCTATGGTTGCTTCAGCTGTCTTCTCGATAGCTTCCTCGTTTTCCACCAACGTCTGGATGCTGCTAGTTTTGAGATTCTTCACTGGATGCCTAGTGTCAGCCTCCAGCGCGACCGTGTATGCGTATCTCGGTGAGATGCACACGGGCTCCCGGCGTGCGGCCGCGATCGCTTGGGGTTCAGCCTTCATATCTTTCTCCTTTATGATATTGCCAGTAATTGGTTTCGACATCATGTACGCCAATTAA
>DPOGS204444-PA
MDNSDNSSSERSLERLTEIKAFIEASKKTNEKAEELQVDADKSLSKLNEVVFDDAFELTGHGKFNHIVLMTCGLIMLNVSMESVGMSYVITAAECELGLTSEHKGLINAAAFIGIISTSFLWGYLGDRCGRRAVMLPAMVASAVFSIASSFSTNVWMLLVLRFFTGCLVSASSATVYAYLGEMHTGSRRAAAIAWGSAFISFSFMILPVIGFDIMYAN-