Monarch geneset OGS2.0

DPOGS204481
TranscriptDPOGS204481-TA1914 bp
ProteinDPOGS204481-PA637 aa
Genomic positionDPSCF300002 + 1066170-1069753
RNAseq coverage158x (Rank: top 52%)
Annotation
HeliconiusHMEL0156862e-16579.95% 
BombyxBGIBMGA007824-TA4e-17980.05% 
DrosophilaSucb-PA3e-13462.80% 
EBI UniRef50UniRef50_Q96I992e-12059.72%Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial n=34 Tax=Eukaryota RepID=SUCB2_HUMAN
NCBI RefSeqXP_001651079.13e-13866.85%succinyl-coa synthetase beta chain [Aedes aegypti]
NCBI nr blastpgi|1571103825e-13766.85%succinyl-coa synthetase beta chain [Aedes aegypti]
NCBI nr blastxgi|1571103826e-13466.85%succinyl-coa synthetase beta chain [Aedes aegypti]
Group
Gene OntologyGO:00081523.7e-224metabolic process
GO:00038243.7e-224catalytic activity
GO:00055242.9e-55ATP binding
GO:00168742.9e-55ligase activity
KEGG pathwayaag:AaeL_AAEL0055528e-138 
 K01900 (LSC2)maps-> Citrate cycle (TCA cycle)
    Propanoate metabolism
InterPro domain[274-638] IPR0058093.7e-224Succinyl-CoA synthetase, beta subunit
[29-236] IPR0136506.4e-69ATP-grasp fold, succinyl-CoA synthetase-type
[489-633] IPR0161021.2e-59Succinyl-CoA synthetase-like
[345-488] IPR0138162.9e-55ATP-grasp fold, subdomain 2
[273-344] IPR0138152.7e-22ATP-grasp fold, subdomain 1
[511-631] IPR0058112.2e-19ATP-citrate lyase/succinyl-CoA ligase
Orthology groupMCL15084 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS204481-TA
ATGTCTGCGATAACCAAAACTAGTAAGATATTTCGTGTACTTATGCATCAATATTCACCACGTGTTACATGTAAAAGAAATTTAAATCTTCAAGAATATCATAGCAAAGACCTGTTAAAAAAGCACCAAGTTTCTATACAAAATTTTCGACTTTTGGATTCATCTTTGGACTCTAAGGTGCTCTCCGACTTTAAGGCTAATGAATATGTAGTTAAGGCTCAAATATTGGCTGGTGGAAGAGGAAAAGGCCATTTTAATAATGGATTTAAAGGTGGTGTCCATTTAACAAAGAATCCTAATGAAATTGTAAACTTAGCAAGAAATATGATTGGACATAAACTCATCACAAAACAAACGCCTAAAGACGGCATATTGGTGGATAAAGTAATGATAGCAGAAAGTGTTAACATAAAGAGGGAAACATACTTGAGTATAGTGTTAGAAAGAGCATATAATGGTGCAGCTTTAGTAGCATCTCCAGCGGGAGGAATGGATATTGAAGCGGTGGCTGAAAAAACTCCTCATTTAATAAAAACTGTTCCTATTGACATATATGAGGGCATAACAGATAAAACTGCTAGAGAAGTTGCCGAGTTTCTAGAATTTAAAGGGCCTCTACTTAATAAATGTGCTGATGAAATTAAAAAGTTATGGCAGCTATTTTTAAAGGTAGATGCTACACAACTAGAAATTAATCCTCTAGTTGAAACTGATGATGGTAAAGTTGTAGCTGTTGATGCAAAGATCAATTTTGATGGCAATGCTGAGTTTAGGCAGAAGGAAATCTTTGCACTTGATGACAAGTCTGAGACAGATCCTAGAGAGGTGCTCTCCGACTTTAAGGCTGATGAATATGTAGTTAAGGCTCAAATATTGGCTGGTGGAAGAGGAAAAGGCCATTTTAACAATGGATTTAAAGGTGGTGTCCATTTAACAAAGAATCCTAATGAAATTGTAAACTTAGCAAGAAATATGATTGGACATAAACTTATCACAAAACAAACGCCTAAAGACGGCATATTGGTGGATAAAGTAATGATAGCAGAAAGTGTTAACATAAAGAGGGAAACATACTTGAGTATAGTGTTAGAAAGAGCATATAATGGTGCAGCTTTAGTAGCATCTCCAGCGGGAGGAATGGATATTGAAGCGGTGGCTGAAAAAACTCCTCATTTAATAAAAACTGTTCCCATCGACATATATGAGGGCATAACAGATAAAACTGCTAGAGAAGTTGCCGAGTTTCTAGAATTTAAAGGGCCTCTACTTAATAAATGTGCTGATGAAATTAAAAAGTTATGGCAGCTATTTTTAAAGGTAGATGCTACACAACTAGAAATTAATCCTCTAGTTGAAACTGATGATGGTAAAGTTGTAGCTGTTGACGCAAAGATCAATTTTGATGACAATGCTGAGTTTAGGCAGAAGGAAATCTTTGCACTTGATGACAAGTCTGAGACAGATCCTAGAGAGAGAGAGGCAGAGGCTCATAATCTTACATACATTGATATGGATGGTAGTATTGGTTGCATGGTCAATGGAGCCGGCCTGGCTATGGCCACAATGGATCTTATTGTGTTGAGTGGTGGGAGACCAGCTAATTTCTTGGATCTTGGAGGTGGTGTGGGACAAGCACAAGTTTCGACTGCTTTGAAGATACTGGAATCAGATCCTAAAGTAAAGGCAATATTTGTAAATGTGTTTGCTGGTATCGTAAATTGTGCTATGGTTGCAAAAGGTATTGTTGCTGTATGCAAAGAAAATCTACCAAAGCATCCAATAGTGATTCGTTTGGAAGGAACAAACGCATCTATAGCCAAAAAAATCCTGGAAGAATCTGGCCTGCCTTTGCACATAGTAAATGATGCTGATGAAGCAGCAAAAAAAGCTGTTGCATTGGCGGAATCAAAATAA

Protein sequence:

>DPOGS204481-PA
MSAITKTSKIFRVLMHQYSPRVTCKRNLNLQEYHSKDLLKKHQVSIQNFRLLDSSLDSKVLSDFKANEYVVKAQILAGGRGKGHFNNGFKGGVHLTKNPNEIVNLARNMIGHKLITKQTPKDGILVDKVMIAESVNIKRETYLSIVLERAYNGAALVASPAGGMDIEAVAEKTPHLIKTVPIDIYEGITDKTAREVAEFLEFKGPLLNKCADEIKKLWQLFLKVDATQLEINPLVETDDGKVVAVDAKINFDGNAEFRQKEIFALDDKSETDPREVLSDFKADEYVVKAQILAGGRGKGHFNNGFKGGVHLTKNPNEIVNLARNMIGHKLITKQTPKDGILVDKVMIAESVNIKRETYLSIVLERAYNGAALVASPAGGMDIEAVAEKTPHLIKTVPIDIYEGITDKTAREVAEFLEFKGPLLNKCADEIKKLWQLFLKVDATQLEINPLVETDDGKVVAVDAKINFDDNAEFRQKEIFALDDKSETDPREREAEAHNLTYIDMDGSIGCMVNGAGLAMATMDLIVLSGGRPANFLDLGGGVGQAQVSTALKILESDPKVKAIFVNVFAGIVNCAMVAKGIVAVCKENLPKHPIVIRLEGTNASIAKKILEESGLPLHIVNDADEAAKKAVALAESK-