DPOGS206026 | ||
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Transcript | DPOGS206026-TA | 756 bp |
Protein | DPOGS206026-PA | 251 aa |
Genomic position | DPSCF300028 - 1650321-1653654 | |
RNAseq coverage | 190x (Rank: top 48%) |
Annotation | ||||
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Heliconius | HMEL003177 | 6e-10 | 26.83% |   |
Bombyx | BGIBMGA007987-TA | 2e-06 | 26.11% |   |
Drosophila | PGRP-SB2-PA | 2e-10 | 29.71% |   |
EBI UniRef50 | UniRef50_Q5TRK8 | 3e-12 | 24.90% | AGAP005552-PB n=2 Tax=Anopheles gambiae RepID=Q5TRK8_ANOGA |
NCBI RefSeq | XP_001688678.1 | 6e-13 | 24.90% | peptidoglycan recognition protein long class (AGAP005552-PA) [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|158294363 | 1e-11 | 24.90% | AGAP005552-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|158294365 | 5e-10 | 25.20% | AGAP005552-PB [Anopheles gambiae str. PEST] |
Group | ||||
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Gene Ontology | GO:0008745 | 3.5e-14 | N-acetylmuramoyl-L-alanine amidase activity | |
GO:0009253 | 3.5e-14 | peptidoglycan catabolic process | ||
GO:0008270 | 1.5e-07 | zinc ion binding | ||
KEGG pathway |   | |||
InterPro domain | [95-223] IPR002502 | 3.5e-14 | N-acetylmuramoyl-L-alanine amidase domain | |
[95-228] IPR006619 | 1.5e-07 | Peptidoglycan recognition protein family domain, metazoa/bacteria | ||
Orthology group | MCL20182 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206026-TA
ATGATTGAATTAAAAGTGCAAAATTTAGATAATGTTAAAAACGATCATGAAACTCGCCAAACCGTTTTTAACACGGATGTCGATGGAATAATGGATGAGAACGAGGCGACTCCTCTCCTTCGTCACTTCCATCGTGTTAGTGCTCGCGGTGTGAATTCCATCACCATCGCCATTATCGCTGGCTTGACTCTGCTGTTCGTAACAGCTTTGGGCATCGGGATATACCTGCTGGTGGTGCAGAACCATTCCGAAAACGTTCTGCCACCCGTTAACGTGGAGGAGCCGTATGTGTACGTGTCTCGTTCCGAGTGGGATGATGATGCTAAGCCCTCCTCCGAACATTTCAAGGCCCAGCAAGTGGTCTTGCTCCAAACCGACACTCGCCAATGCTGGGATCTTGAAGGATGTCTACTGGTGCTCAAAGATATGAAGGCCGCATTGGGACCGAACAGGACTCTGCCCTACAACTTCCTGGTCGCTGACGGAATAGTTTATGAGAACATCGGATTTCATACTTCGGCCTTGCCTGAGCTATCGGCTATAGTGGTCGCCTTTATAGGTAATTTCTACCATGTGCCACCTACCATTGAGCAAATTAACACGGCGAAGAATCTCCTGAGGGCCGCAGTGAAGGATAAGAATTTAGAGGAGTCCTATACTATCATAGGGAAGGCAACCGATGTGCTACCGAAATTTTTGTTCCGTAGCTTCGAAAATTTGCCCCAATGGAATCGTAAATTATCTGATGATTTTTAA
>DPOGS206026-PA
MIELKVQNLDNVKNDHETRQTVFNTDVDGIMDENEATPLLRHFHRVSARGVNSITIAIIAGLTLLFVTALGIGIYLLVVQNHSENVLPPVNVEEPYVYVSRSEWDDDAKPSSEHFKAQQVVLLQTDTRQCWDLEGCLLVLKDMKAALGPNRTLPYNFLVADGIVYENIGFHTSALPELSAIVVAFIGNFYHVPPTIEQINTAKNLLRAAVKDKNLEESYTIIGKATDVLPKFLFRSFENLPQWNRKLSDDF-