DPOGS206624 | ||
---|---|---|
Transcript | DPOGS206624-TA | 744 bp |
Protein | DPOGS206624-PA | 247 aa |
Genomic position | DPSCF300048 - 789345-790259 | |
RNAseq coverage | 410x (Rank: top 30%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL012310 | 4e-119 | 80.00% | |
Bombyx | BGIBMGA008335-TA | 6e-88 | 86.98% | |
Drosophila | mRpS2-PA | 2e-95 | 73.18% | |
EBI UniRef50 | UniRef50_Q8MSS7 | 2e-93 | 73.18% | Mitochondrial ribosomal protein S2 n=20 Tax=Endopterygota RepID=Q8MSS7_DROME |
NCBI RefSeq | XP_001965122.1 | 6e-95 | 74.43% | GF21552 [Drosophila ananassae] |
NCBI nr blastp | gi|194766019 | 1e-93 | 74.43% | GF21552 [Drosophila ananassae] |
NCBI nr blastx | gi|194766019 | 9e-92 | 74.43% | GF21552 [Drosophila ananassae] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006412 | 7.6e-104 | translation | |
GO:0003735 | 7.6e-104 | structural constituent of ribosome | ||
GO:0015935 | 7.6e-104 | small ribosomal subunit | ||
GO:0005840 | 7.6e-25 | ribosome | ||
GO:0005622 | 7.6e-25 | intracellular | ||
KEGG pathway | mbr:MONBRDRAFT_21836 | 1e-29 | ||
K02967 (RP-S2, rpsB) | maps-> | Ribosome | ||
InterPro domain | [38-239] IPR005706 | 7.6e-104 | Ribosomal protein S2, bacteria/mitochondria/plastid | |
[56-246] IPR023591 | 1.7e-56 | Ribosomal protein S2, flavodoxin-like domain | ||
[59-157] IPR001865 | 7.6e-25 | Ribosomal protein S2 | ||
Orthology group | MCL13799 | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS206624-TA
ATGTTGCCCAGATGTTTACACCGTCATGTGAAAAATGGTATTACACTAACCCGATATTATTCTAATGTTCCGCAGCCAGAGCCAGCACAGGTTCTAGTTGATGAATCCGTCAAAACTAGTCCACTAGATCATCCAGATTTTTTTCAAGTCCACAATTTATTTACAGTCAAAGACTTATTTGAAGCTGGTGTACATTATGGACACAAAGAGGGGTCATTGAATGAATATATGTTACCCTATATTTATGGATCCAGACAGGGCCATTTAATTTTTGATTTAGATATAACAGCAGAACATTTGCGAAAGGCCCTTAATTTTGCTGCCCATATTGCATATAGAGGTGGTATTATATGTTTTTTCAATAGGAATGCACTTAATGCACATTTAGTTGAAAAAACTGCACAAGAATGTGGGGAATATGCACACACAAGGTTTTGGAGAGGTGGGATTTTCACAAATGCTAATCATCAATTTGGGGCTGTCACCAGGTTACCAGATTTGTGCATTTTCATGAATACACAAAACAATATATTGAACCAACACACAGCAGTACGAGACAGTGCAAAAATGTTAATACCAACCATTGGCATTGTAGACTCAAATTGCAGTCCCAACTTAATAACATATCCCGTACCAGGTAATGATGATACACCTCGGGCTATAGAAATGTATTGTAAGCTCTTTAAAGAAGCAATTAAGAGAGGAAAAGATGCAAGGATGAAGTTTCTACAAGAAAACAACTAG
>DPOGS206624-PA
MLPRCLHRHVKNGITLTRYYSNVPQPEPAQVLVDESVKTSPLDHPDFFQVHNLFTVKDLFEAGVHYGHKEGSLNEYMLPYIYGSRQGHLIFDLDITAEHLRKALNFAAHIAYRGGIICFFNRNALNAHLVEKTAQECGEYAHTRFWRGGIFTNANHQFGAVTRLPDLCIFMNTQNNILNQHTAVRDSAKMLIPTIGIVDSNCSPNLITYPVPGNDDTPRAIEMYCKLFKEAIKRGKDARMKFLQENN-