DPOGS206928 | ||
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Transcript | DPOGS206928-TA | 606 bp |
Protein | DPOGS206928-PA | 201 aa |
Genomic position | DPSCF300001 - 1119756-1121854 | |
RNAseq coverage | 1101x (Rank: top 11%) |
Annotation | ||||
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Heliconius | HMEL015461 | 3e-63 | 92.86% |   |
Bombyx | BGIBMGA012904-TA | 4e-109 | 97.38% |   |
Drosophila | Rab35-PB | 7e-87 | 77.72% |   |
EBI UniRef50 | UniRef50_Q9W5X0 | 8e-85 | 77.72% | LD21953p n=18 Tax=Diptera RepID=Q9W5X0_DROME |
NCBI RefSeq | XP_967046.1 | 1e-99 | 85.07% | PREDICTED: similar to ras-related protein Rab, putative [Tribolium castaneum] |
NCBI nr blastp | gi|91084289 | 2e-98 | 85.07% | PREDICTED: similar to ras-related protein Rab, putative [Tribolium castaneum] |
NCBI nr blastx | gi|91084289 | 2e-95 | 85.07% | PREDICTED: similar to ras-related protein Rab, putative [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0007264 | 9.6e-95 | small GTPase mediated signal transduction | |
GO:0005525 | 9.6e-95 | GTP binding | ||
GO:0015031 | 9.6e-95 | protein transport | ||
GO:0016020 | 1.6e-31 | membrane | ||
GO:0007165 | 1.6e-31 | signal transduction | ||
GO:0006184 | 1.6e-31 | GTP catabolic process | ||
GO:0003924 | 1.6e-31 | GTPase activity | ||
GO:0005622 | 1.2e-22 | intracellular | ||
GO:0006886 | 4.8e-09 | intracellular protein transport | ||
GO:0006913 | 4.8e-09 | nucleocytoplasmic transport | ||
KEGG pathway |   | |||
InterPro domain | [9-171] IPR003579 | 9.6e-95 | Small GTPase superfamily, Rab type | |
[10-169] IPR001806 | 1.2e-61 | Small GTPase superfamily | ||
[9-164] IPR005225 | 9.4e-33 | Small GTP-binding protein domain | ||
[6-171] IPR020849 | 1.6e-31 | Small GTPase superfamily, Ras type | ||
[11-171] IPR003578 | 1.2e-22 | Small GTPase superfamily, Rho type | ||
[14-197] IPR002041 | 4.8e-09 | Ran GTPase | ||
Orthology group | MCL15220 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS206928-TA
ATGGCCCGCGAGTTTGATCATCTTTTTAAACTGCTGATTATCGGTGACAGTGGTGTAGGAAAAAGCTGTCTCCTTCTCCGTTTTGCGGACAACACTTTCTCCGGTAGTTATATTACAACGATCGGTGTGGATTTCAAAATAAGAACTTTAGAGATAAATGGTGAAAGAGTTAAACTTCAGATATGGGATACAGCCGGGCAAGAGAGGTTTAGAACGATCACGAGCACGTACTATAGAGGGACTCACGGTGTCATCGTGGTATACGATGTCACTAATGGGGAGTCGTTTGCTAATGTGAAGAGGTGGTTGCACGAGATCGAACAAAATTGTGATGTCGTCAACAAAGTACTAGTTGGTAATAAAAACGATTGTCCATCAAGAAAAGTAGTCGTGACGGAGGATGCTCAAAGATTTGCAAATCAAATGAACATACCATTGTTTGAGACAAGTGCTAAAGAAAACATCAATGTAGAGGAAATGTTTCTAACTATTACAAAAATGGTTCTAAGGTCTAAGTTGGAAATGAAGGAGAGACAAAATGTAACAGCAAACGACACAGTAAACTTAAAGAAGAGCCACAAAGGGAAGAAAAAATGTTGCCACTGA
>DPOGS206928-PA
MAREFDHLFKLLIIGDSGVGKSCLLLRFADNTFSGSYITTIGVDFKIRTLEINGERVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNKVLVGNKNDCPSRKVVVTEDAQRFANQMNIPLFETSAKENINVEEMFLTITKMVLRSKLEMKERQNVTANDTVNLKKSHKGKKKCCH-