DPOGS207065 | ||
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Transcript | DPOGS207065-TA | 507 bp |
Protein | DPOGS207065-PA | 168 aa |
Genomic position | DPSCF300001 + 2284549-2286533 | |
RNAseq coverage | 2093x (Rank: top 6%) |
Annotation | ||||
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Heliconius | HMEL010199 | 7e-101 | 100.00% |   |
Bombyx | BGIBMGA013112-TA | 5e-92 | 95.51% |   |
Drosophila | CG40045-PA | 2e-92 | 95.21% |   |
EBI UniRef50 | UniRef50_P62253 | 1e-80 | 83.43% | Ubiquitin-conjugating enzyme E2 G1 n=66 Tax=Eukaryota RepID=UB2G1_HUMAN |
NCBI RefSeq | NP_001040284.1 | 5e-94 | 97.62% | ubiquitin conjugating enzyme isoform 1 [Bombyx mori] |
NCBI nr blastp | gi|114053265 | 8e-93 | 97.62% | ubiquitin conjugating enzyme isoform 1 [Bombyx mori] |
NCBI nr blastx | gi|114053265 | 1e-94 | 97.62% | ubiquitin conjugating enzyme isoform 1 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016881 | 2.8e-51 | acid-amino acid ligase activity | |
KEGG pathway | nvi:100120247 | 2e-91 |   | |
  | K10575 (UBE2G1, UBC7) | maps-> | Ubiquitin mediated proteolysis | |
  |   |   | Parkinson's disease | |
  |   |   | Protein processing in endoplasmic reticulum | |
InterPro domain | [5-163] IPR016135 | 1.9e-66 | Ubiquitin-conjugating enzyme/RWD-like | |
[10-159] IPR000608 | 2.8e-51 | Ubiquitin-conjugating enzyme, E2 | ||
Orthology group | MCL16007 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207065-TA
ATGTCAGAGCCACAGTCTTCGCTTTTATTAAAAAAGCAATTAGCAGAACTGAACAAAAATCCAGTAGAAGGATTTTCTGCTGGCTTAATAGATGACAATGACATATACAGATGGGAGGTTCTTATTATCGGTCCTCCTGATACATTGTATGAGGGTGGATTTTTTAAAGCACACTTGCATTTTCCAAAGGAGTATCCTTTAAGACCACCAAGAATGAAATTTGTTACTGAGATTTGGCATCCAAACATTGAGAAGAATGGCGATGTCTGCATATCAATATTGCATGAACCGGGAGATGACAAGTGGGGTTATGAGAAGGCGTCAGAAAGATGGCTGCCAGTTCACACTGTTGAAACTATCCTCATAAGTGTAATATCGATGCTTGCTGATCCCAATGACGAGAGTCCTGCCAATGTTGATGCTGCTAAAGAATGGAGGGAGAGGTATTCGGATTTCAAAAAGAAAGTTGCCAGATGTGTTAGGAAAAGTCAAGAAGATTGTTTTTAG
>DPOGS207065-PA
MSEPQSSLLLKKQLAELNKNPVEGFSAGLIDDNDIYRWEVLIIGPPDTLYEGGFFKAHLHFPKEYPLRPPRMKFVTEIWHPNIEKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSDFKKKVARCVRKSQEDCF-