DPOGS207506 | ||
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Transcript | DPOGS207506-TA | 639 bp |
Protein | DPOGS207506-PA | 212 aa |
Genomic position | DPSCF300177 - 389865-393504 | |
RNAseq coverage | 1462x (Rank: top 9%) |
Annotation | ||||
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Heliconius | HMEL017959 | 6e-111 | 98.96% |   |
Bombyx | BGIBMGA001928-TA | 1e-110 | 98.96% |   |
Drosophila | Rab2-PA | 2e-108 | 92.02% |   |
EBI UniRef50 | UniRef50_Q8WUD1 | 6e-103 | 82.87% | Ras-related protein Rab-2B n=327 Tax=root RepID=RAB2B_HUMAN |
NCBI RefSeq | XP_002155452.1 | 2e-110 | 89.62% | PREDICTED: similar to predicted protein [Hydra magnipapillata] |
NCBI nr blastp | gi|321478009 | 2e-110 | 91.04% | hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex] |
NCBI nr blastx | gi|112983258 | 1e-110 | 94.86% | GTP-binding protein RAB2 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0007264 | 6.2e-109 | small GTPase mediated signal transduction | |
GO:0005525 | 6.2e-109 | GTP binding | ||
GO:0015031 | 6.2e-109 | protein transport | ||
GO:0016020 | 1.1e-37 | membrane | ||
GO:0007165 | 1.1e-37 | signal transduction | ||
GO:0006184 | 1.1e-37 | GTP catabolic process | ||
GO:0003924 | 1.1e-37 | GTPase activity | ||
GO:0005622 | 2.5e-11 | intracellular | ||
GO:0006886 | 1.1e-05 | intracellular protein transport | ||
GO:0006913 | 1.1e-05 | nucleocytoplasmic transport | ||
KEGG pathway |   | |||
InterPro domain | [7-170] IPR003579 | 6.2e-109 | Small GTPase superfamily, Rab type | |
[8-168] IPR001806 | 3.2e-63 | Small GTPase superfamily | ||
[4-170] IPR020849 | 1.1e-37 | Small GTPase superfamily, Ras type | ||
[7-161] IPR005225 | 9.6e-34 | Small GTP-binding protein domain | ||
[9-170] IPR003578 | 2.5e-11 | Small GTPase superfamily, Rho type | ||
Orthology group | MCL14877 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS207506-TA
ATGGCATACGCCTATCTTTTCAAATACATCATCATTGGCGATACAGGTGTTGGTAAATCCTGCCTTCTCCTTCAGTTCACCGATAAAAGGTTCCAACCTGTCCATGACCTCACCATTGGTGTTGAGTTTGGTGCTCGCATGATCACCATCGATGGAAAACAGATCAAACTTCAGATTTGGGACACTGCTGGGCAGGAGGCCTTTAGATCGATAACCCGCTCATACTATCGTGGTGCGGCCGGTGCTTTGCTTGTCTACGACATCACCAGACGGGACACTTTCAACCATCTGACTACATGGCTTGAGGATGCTCGCCAGCACTCTAACTCCAACATGGTTATCATGCTCATCGGTAATAAGAGTGACTTGGAGTCCCGTCGTGAAGTAAAGAAGGAAGAGGGCGAGGCGTTCGCTCGTGAGCACGGACTGGTGTTCATGGAGACATCAGCTAAGACGGCTGCTAACGTTGAAGAGGCTTTCATCAACACCGCCAAGGAAATATATGAAAAGATACAGGAGGGAGTCTTTGATATCAACAATGAGGCCAACGGTATTAAGATCGGTCCTCAACACGGTGGGGCGGGGTCGGGTGGTGGAGCGCCGGGTGCTGGGGGTGCACCGCCTGGAGGGTGTTGTTAG
>DPOGS207506-PA
MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHGGAGSGGGAPGAGGAPPGGCC-