| DPOGS208045 | ||
|---|---|---|
| Transcript | DPOGS208045-TA | 450 bp |
| Protein | DPOGS208045-PA | 149 aa |
| Genomic position | DPSCF300203 + 256718-257502 | |
| RNAseq coverage | 379x (Rank: top 32%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014557 | 3e-66 | 76.00% | |
| Bombyx | BGIBMGA001474-TA | 5e-64 | 74.00% | |
| Drosophila | mRpL23-PB | 7e-54 | 63.33% | |
| EBI UniRef50 | UniRef50_Q2F5Y6 | 4e-59 | 71.33% | Ribosomal protein L23 n=2 Tax=Bombyx mori RepID=Q2F5Y6_BOMMO |
| NCBI RefSeq | XP_001862929.1 | 2e-58 | 70.20% | mitochondrial ribosomal protein, L23 [Culex quinquefasciatus] |
| NCBI nr blastp | gi|87248357 | 1e-58 | 71.33% | ribosomal protein L23 [Bombyx mori] |
| NCBI nr blastx | gi|87248357 | 2e-60 | 71.33% | ribosomal protein L23 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 2e-18 | ribosome | |
| GO:0006412 | 2e-18 | translation | ||
| GO:0005622 | 2e-18 | intracellular | ||
| GO:0003735 | 2e-18 | structural constituent of ribosome | ||
| GO:0000166 | 8.2e-11 | nucleotide binding | ||
| KEGG pathway | ||||
| InterPro domain | [11-106] IPR012678 | 2e-18 | Ribosomal protein L23/L15e | |
| [33-103] IPR013025 | 2.4e-12 | Ribosomal protein L25/L23 | ||
| [35-106] IPR012677 | 8.2e-11 | Nucleotide-binding, alpha-beta plait | ||
| Orthology group | MCL14664 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208045-TA
ATGTCAACACGATGGTATCCCATATATCAAAAGGGAAATCCTCAACTTCGAGTCTTTTTACCGAACTTTTGGATGAAGTTGGTCCGCCCTTATGATAAACAACAGCCAAACATAGTTCATTTTCATTGTTCAATGGAAATGACAAAATATGACATAAAAAACTATCTTGAAAAAATCTACAATGTGCCAGTGGTTCATGTAAGAACAAAGATAGCTTTGGGGAAATTTAAAAAAGAAATAGTTAAAGGGTACATTACCAAAGATGAAGATGTTAAAGTTGCCTATGTTACATTGCCAAAAACACATAAGTTTGAATTTCCGGACATATTTGAAAAGAAGACGGGCAGCGAAGACGATGCGAAAGCATTAGAAGAAACAAAGAAATCATTCAAAAAATTCCTTGAAAAGAACAAAGACAGAACCGATGTTCCAAGCTGGTTTTCAATTTGA
>DPOGS208045-PA
MSTRWYPIYQKGNPQLRVFLPNFWMKLVRPYDKQQPNIVHFHCSMEMTKYDIKNYLEKIYNVPVVHVRTKIALGKFKKEIVKGYITKDEDVKVAYVTLPKTHKFEFPDIFEKKTGSEDDAKALEETKKSFKKFLEKNKDRTDVPSWFSI-