| DPOGS208056 | ||
|---|---|---|
| Transcript | DPOGS208056-TA | 402 bp |
| Protein | DPOGS208056-PA | 133 aa |
| Genomic position | DPSCF300203 + 397323-398270 | |
| RNAseq coverage | 29134x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012133 | 7e-74 | 98.50% | |
| Bombyx | BGIBMGA001483-TA | 8e-74 | 99.24% | |
| Drosophila | RpS17-PB | 2e-61 | 86.47% | |
| EBI UniRef50 | UniRef50_F4WRX8 | 2e-59 | 88.80% | 40S ribosomal protein S17 n=7 Tax=cellular organisms RepID=F4WRX8_ACREC |
| NCBI RefSeq | NP_001037267.1 | 4e-73 | 99.25% | ribosomal protein S17 [Bombyx mori] |
| NCBI nr blastp | gi|112984008 | 1e-71 | 99.25% | ribosomal protein S17 [Bombyx mori] |
| NCBI nr blastx | gi|112984008 | 2e-69 | 99.25% | ribosomal protein S17 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 4.6e-96 | ribosome | |
| GO:0006412 | 4.6e-96 | translation | ||
| GO:0005622 | 4.6e-96 | intracellular | ||
| GO:0003735 | 4.6e-96 | structural constituent of ribosome | ||
| KEGG pathway | tca:657536 | 2e-62 | ||
| K02962 (RP-S17e, RPS17) | maps-> | Ribosome | ||
| InterPro domain | [1-123] IPR001210 | 4.6e-96 | Ribosomal protein S17e | |
| Orthology group | MCL12018 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208056-TA
ATGGGTCGTGTCAGGACTAAAACCGTAAAGAAAGCAGCCAAAATCATTATCGAGAAGTATTACACAAGGCTTACTCTTGATTTTGACACCAACAAGAGAATATGTGAGGAAATCGCAATAATTCCAACCAAACCCCTTCGTAACAAAATTGCCGGGTTTGCCACCCACTTAATGAGACGTCTCAGACATTCCCAAGTCCGAGGAATCTCCATCAAGCTGCAGGAGGAGGAGCGTGAGAGACGTGACAACTATGTTCCAGAAGTCTCCGCCCTGGAACATGACATCATTGAAGTTGATCCTGACACCAAGGAAATGTTGAAAATGCTTGACTTCAACAACATCAATGGTCTTCAACTGACGCAGCCCGCTACCCAGGGTGGCTATGGTGGCAGACGTAATTAA
>DPOGS208056-PA
MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKEMLKMLDFNNINGLQLTQPATQGGYGGRRN-