| DPOGS208866 | ||
|---|---|---|
| Transcript | DPOGS208866-TA | 441 bp |
| Protein | DPOGS208866-PA | 146 aa |
| Genomic position | DPSCF300009 - 1703334-1703774 | |
| RNAseq coverage | 77x (Rank: top 65%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002932 | 1e-64 | 73.97% | |
| Bombyx | BGIBMGA008096-TA | 7e-69 | 79.45% | |
| Drosophila | CG31549-PA | 4e-57 | 69.86% | |
| EBI UniRef50 | UniRef50_F4WC28 | 2e-53 | 66.21% | Tetratricopeptide repeat protein 27 n=2 Tax=Acromyrmex echinatior RepID=F4WC28_ACREC |
| NCBI RefSeq | NP_001040155.1 | 3e-64 | 76.35% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
| NCBI nr blastp | gi|114050773 | 6e-63 | 76.35% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
| NCBI nr blastx | gi|114050773 | 2e-60 | 76.35% | short-chain dehydrogenease/reductase-like [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005488 | 8.5e-46 | binding | |
| GO:0008152 | 1.6e-09 | metabolic process | ||
| GO:0016491 | 1.6e-09 | oxidoreductase activity | ||
| KEGG pathway | kpe:KPK_2230 | 1e-21 | ||
| K00059 (fabG) | maps-> | Biosynthesis of unsaturated fatty acids | ||
| Fatty acid biosynthesis | ||||
| InterPro domain | [1-143] IPR016040 | 8.5e-46 | NAD(P)-binding domain | |
| [18-34] IPR002347 | 5.6e-26 | Glucose/ribitol dehydrogenase | ||
| [1-61] IPR002198 | 1.6e-09 | Short-chain dehydrogenase/reductase SDR | ||
| Orthology group | MCL27826 | Specific divergent | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS208866-TA
ATGAACACAAACGTTCGGGCTCCATACCATTTGACTATGATTGCTGCACCATATTTGATTAAAAGCAAAGGCAATATTATAAATGTGTCAAGTTTGGCGGGATTGCGAGCTTTTCCCAGTACACTCGCCTATTGTACTTCTAAGGCAGCATTAGATCAGTTTACAAGATGCGTATGTCTTGAACTGGCGCCGAAAGGTGTGAGAGTCAATGCTGTTAATCCTGGTGTGATTGAAACCGGAATTCATTTAAAAGGAGCAATGAATGAAGAAGAGTATGAAGCTTATCTCATCAGATGTAAAGAGACTCATGCATTGGGAAGAACTGGCAATGTTAAAGAGGTATCGAATGTTATAGTATTTTTGGCTAGCGACGCTGCAAGTAATATCACTGGTGCTACAATCCCTGTTGATGGAGGCCGACATGCTATGTGTCCTCGATAA
>DPOGS208866-PA
MNTNVRAPYHLTMIAAPYLIKSKGNIINVSSLAGLRAFPSTLAYCTSKAALDQFTRCVCLELAPKGVRVNAVNPGVIETGIHLKGAMNEEEYEAYLIRCKETHALGRTGNVKEVSNVIVFLASDAASNITGATIPVDGGRHAMCPR-