DPOGS208935 | ||
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Transcript | DPOGS208935-TA | 585 bp |
Protein | DPOGS208935-PA | 194 aa |
Genomic position | DPSCF300009 + 114656-115470 | |
RNAseq coverage | 651x (Rank: top 20%) |
Annotation | ||||
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Heliconius | HMEL004763 | 1e-106 | 92.75% |   |
Bombyx | BGIBMGA002406-TA | 6e-108 | 95.31% |   |
Drosophila | Jafrac2-PB | 1e-90 | 78.95% |   |
EBI UniRef50 | UniRef50_O08807 | 7e-92 | 81.15% | Peroxiredoxin-4 n=7 Tax=Eutheria RepID=PRDX4_MOUSE |
NCBI RefSeq | XP_001648972.1 | 3e-96 | 84.21% | peroxiredoxins, prx-1, prx-2, prx-3 [Aedes aegypti] |
NCBI nr blastp | gi|157674503 | 4e-98 | 88.42% | putative peroxiredoxin [Lutzomyia longipalpis] |
NCBI nr blastx | gi|157674503 | 3e-97 | 88.42% | putative peroxiredoxin [Lutzomyia longipalpis] |
Group | ||||
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Gene Ontology | GO:0016209 | 2.2e-36 | antioxidant activity | |
GO:0055114 | 2.2e-36 | oxidation-reduction process | ||
GO:0016491 | 2.2e-36 | oxidoreductase activity | ||
GO:0051920 | 2.4e-15 | peroxiredoxin activity | ||
KEGG pathway |   | |||
InterPro domain | [1-191] IPR012336 | 4.3e-72 | Thioredoxin-like fold | |
[2-134] IPR000866 | 2.2e-36 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | ||
[155-190] IPR019479 | 2.4e-15 | Peroxiredoxin, C-terminal | ||
Orthology group | MCL16648 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS208935-TA
ATGATCTCGAAACCAGCCCCGGAGTGGGAGGCTACAGCTGTCGTTAATGGCGAGATAACGCAACTTTCACTATCAAGTTTTAAAGGAAAATATTTAGTCTTCTTCTTTTATCCCTTAGACTTCACCTTTGTTTGTCCTACTGAAATTTTGGCCTTCTCTGAAAGAATTGAAGAGTTCAGAAAACTCAACACTGAAGTAGTAGCATGTTCCGTAGACTCACACTTTACTCATCTAGCCTGGATTAACACTCCTCGGAAAGAGGGAGGTCTAGGAAAAATTAAAATCCCATTATTAAGTGATCTCACACATTCCATTGCCAAAGACTATGGGGTATATTTAGAAGATTTGGGTCACACTTTGAGAGGTTTATTCATAATTGATGATAAAGGAATTCTTAGACAAATTACAATGAATGATCTGCCAGTTGGCAGATCTGTGGATGAAACGCTAAGGCTGGTTCAAGCATTCCAGTACACTGACAAACATGGCGAGGTTTGTCCGGCGGGATGGAAACCAGGTCAAGATACAATTATTCCCAATCCTGATGAAAAGAAAAAATATTTTGAAAAGTTGTCAGATCTATAG
>DPOGS208935-PA
MISKPAPEWEATAVVNGEITQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIEEFRKLNTEVVACSVDSHFTHLAWINTPRKEGGLGKIKIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGQDTIIPNPDEKKKYFEKLSDL-