| DPOGS209336 | ||
|---|---|---|
| Transcript | DPOGS209336-TA | 600 bp |
| Protein | DPOGS209336-PA | 199 aa |
| Genomic position | DPSCF300194 + 182846-184199 | |
| RNAseq coverage | 0x (Rank: top 98%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003098 | 2e-21 | 42.45% | |
| Bombyx | BGIBMGA004251-TA | 8e-12 | 40.20% | |
| Drosophila | Odc1-PA | 2e-11 | 33.65% | |
| EBI UniRef50 | UniRef50_E2C5W2 | 5e-13 | 41.11% | Ornithine decarboxylase n=2 Tax=Endopterygota RepID=E2C5W2_HARSA |
| NCBI RefSeq | XP_001604390.1 | 5e-15 | 45.56% | PREDICTED: similar to ornithine decarboxylase [Nasonia vitripennis] |
| NCBI nr blastp | gi|345493669 | 6e-14 | 45.56% | PREDICTED: ornithine decarboxylase-like isoform 1 [Nasonia vitripennis] |
| NCBI nr blastx | gi|345493669 | 5e-13 | 45.56% | PREDICTED: ornithine decarboxylase-like isoform 1 [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003824 | 3e-16 | catalytic activity | |
| GO:0006596 | 6e-12 | polyamine biosynthetic process | ||
| KEGG pathway | nvi:100120787 | 1e-14 | ||
| K01581 (E4.1.1.17, ODC1, speC, speF) | maps-> | Glutathione metabolism | ||
| Arginine and proline metabolism | ||||
| InterPro domain | [89-176] IPR009006 | 3e-16 | Alanine racemase/group IV decarboxylase, C-terminal | |
| [45-100] IPR022644 | 3e-13 | Orn/DAP/Arg decarboxylase 2, N-terminal | ||
| [76-163] IPR022643 | 2.9e-12 | Orn/DAP/Arg decarboxylase 2, C-terminal | ||
| [33-57] IPR002433 | 6e-12 | Ornithine decarboxylase | ||
| [61-79] IPR000183 | 7.8e-07 | Ornithine/DAP/Arg decarboxylase | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209336-TA
ATGGTGTATGAAAAGAGAGTCTCAAAGGCTTTGGTATTGGAAAACAATACCGCTGAAGATGTAGCTAGAGCTATGATAGAAAGTGGACTTCAGAAGGAGCCCTTCTATATATTTGATATGGACAAGGCTTACCAGTTCATACAGCATTTCAGAAAAATGATGCCAAGGATCAAAATGTTTTATGCCGTGAAATCGAACGATAGTTGCATGATGTTAAAGTTAGCCGCTGCACTCGGTGTTGGCTTCGATTGTGCTTCACCGGGTGAAATATATAGAATATTAAAACTCAAAGTACACTCTGAGGGCGAACAATTAAAACCTACTGTATTATGGGGTCCAACCTGTCATCCAATTGATCGCGTACTTGACAACCTTGTTATAATGTTGCCAGCTTGTACGATTTACGATTGGCTCGTGTTTCCGAGTAGAGGGGCTTATAGCATGACTATGGCGTCTAGGTTTTCCACTTTACCAGAACCGCATATACGAAATGTTATATCACAAGAATTGTTTAACATCCTAAAGGATTCTAAAGTTTTGGGTCCTGATGACTTCCTGGAACAGAACATCGCATTTACTTGTAATGAATTTTCTTACTAA
>DPOGS209336-PA
MVYEKRVSKALVLENNTAEDVARAMIESGLQKEPFYIFDMDKAYQFIQHFRKMMPRIKMFYAVKSNDSCMMLKLAAALGVGFDCASPGEIYRILKLKVHSEGEQLKPTVLWGPTCHPIDRVLDNLVIMLPACTIYDWLVFPSRGAYSMTMASRFSTLPEPHIRNVISQELFNILKDSKVLGPDDFLEQNIAFTCNEFSY-