| DPOGS209424 | ||
|---|---|---|
| Transcript | DPOGS209424-TA | 555 bp |
| Protein | DPOGS209424-PA | 184 aa |
| Genomic position | DPSCF300366 + 70321-72492 | |
| RNAseq coverage | 158x (Rank: top 52%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006907 | 3e-89 | 84.24% | |
| Bombyx | BGIBMGA006444-TA | 9e-101 | 92.39% | |
| Drosophila | Scp2-PA | 3e-68 | 61.96% | |
| EBI UniRef50 | UniRef50_O16158 | 3e-66 | 61.96% | Calcium-binding protein n=28 Tax=Endopterygota RepID=O16158_DROME |
| NCBI RefSeq | XP_973286.2 | 3e-72 | 67.93% | PREDICTED: similar to Sarcoplasmic calcium-binding protein 2 CG14904-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|189234331 | 5e-71 | 67.93% | PREDICTED: similar to Sarcoplasmic calcium-binding protein 2 CG14904-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|189234331 | 5e-72 | 67.93% | PREDICTED: similar to Sarcoplasmic calcium-binding protein 2 CG14904-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005509 | 7e-34 | calcium ion binding | |
| KEGG pathway | ||||
| InterPro domain | [4-177] IPR011992 | 7e-34 | EF-hand-like domain | |
| Orthology group | MCL15038 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS209424-TA
ATGTCCATCTCTGAATTCAGGAGGAAGAAGCTTCTTTACGTCTTCAATGTTTTCTTCGATGTCAATCAGAGCGGTACCATTGAAAGGAAGGATTTCGAGTTGGCCATTGAGAAAATCTGCAGTCTCCGCGGCTGGAAACCTGGAGACCCAAAGAACACTGAAACTCACGAGATTATGATCAAGATCTGGGAAGGGCTCAGGAAGAGAGCTGATTCTAACAAGGATGGCCAGGTGTCAGTAGAGGAATGGGTTTCTATGTGGAACGATTATGCTCAGAACCCGTCCGCAGCATTGCAATGGCAGCAATTATATGCTCAGTTCATGTTTCAACTGGAGGACGCCAGTGCTGATGGTACCATAGATTGTGATGAATTCACCACCGTTTGCTCTTCTTATGGTATTAACCCCCAGGAGTGTAAGGTGGCTTTTGGCAAGATGGCCAAGGGCAAGGCGAGTGTCTCTTGGGAGGAGTTCCAGGATTTGTGGAAGGAATATTTCTCTACGGAAGATCCTAACGCGTCAGGAAATTTTATATTCGGCAGAACTAGTTTCTAA
>DPOGS209424-PA
MSISEFRRKKLLYVFNVFFDVNQSGTIERKDFELAIEKICSLRGWKPGDPKNTETHEIMIKIWEGLRKRADSNKDGQVSVEEWVSMWNDYAQNPSAALQWQQLYAQFMFQLEDASADGTIDCDEFTTVCSSYGINPQECKVAFGKMAKGKASVSWEEFQDLWKEYFSTEDPNASGNFIFGRTSF-