DPOGS210101 | ||
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Transcript | DPOGS210101-TA | 573 bp |
Protein | DPOGS210101-PA | 190 aa |
Genomic position | DPSCF300017 + 764090-768326 | |
RNAseq coverage | 6201x (Rank: top 2%) |
Annotation | ||||
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Heliconius | HMEL002978 | 2e-92 | 85.71% |   |
Bombyx | BGIBMGA012680-TA | 7e-95 | 96.49% |   |
Drosophila | pk-PC | 4e-25 | 41.58% |   |
EBI UniRef50 | UniRef50_E3WVE1 | 7e-69 | 74.03% | Putative uncharacterized protein n=1 Tax=Anopheles darlingi RepID=E3WVE1_ANODA |
NCBI RefSeq | XP_001945130.1 | 1e-73 | 75.71% | PREDICTED: similar to four and a half lim domains [Acyrthosiphon pisum] |
NCBI nr blastp | gi|322793841 | 5e-71 | 76.57% | hypothetical protein SINV_04723 [Solenopsis invicta] |
NCBI nr blastx | gi|332021159 | 3e-82 | 81.71% | Four and a half LIM domains protein 2 [Acromyrmex echinatior] |
Group | ||||
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Gene Ontology | GO:0008270 | 4.1e-15 | zinc ion binding | |
KEGG pathway | dre:368250 | 4e-24 |   | |
  | K04511 (PRICKLE) | maps-> | Wnt signaling pathway | |
InterPro domain | [104-168] IPR001781 | 4.1e-15 | Zinc finger, LIM-type | |
Orthology group | MCL11109 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210101-TA
ATGGCTGACGTTGACGTACAAGTTCAGTATACCACCACTGAGAGAAAGACCAGGAAGGTCAAAAAGACATCCAAGCGTAGGGAGTCTAAGGATGGAGAGGTTTCCGTCACCGAACTCGAACAGACCAATACCACCAACGACGATGGCGGTGAATACACCAAGGCGATGAACAAGGACTGGCACAGCGGTCACTTCTGCTGCTGGAAGTGCGATGAGTCCCTCACCGGACAACGCTACGTCCTGAGAGATGAACAGCCCTATTGCATCAAGTGCTACGAGGGTGTCTTCGCCAACGGATGCGAGGAATGCAACAAGATCATCGGCATCGACTCCAAGGATCTGTCGTACAAAGACAAGCACTGGCACGAGGCCTGTTTCCTCTGCGCTAAGTGTCGCGTCTCTCTGGTGGATAAACAGTTCGGCTCCAAGTTAGACAAGATCTACTGCGGCAACTGTTACGACGCCCAGTTCGCCAGCCGCTGCGATGGATGCGGAGAGGTCTTCCGAGCTGTTTATTCAGTCATCTGTCCGTACATAGTTGGTGCTGTACCCTTGCTGGTTAAGGTGTTGTAA
>DPOGS210101-PA
MADVDVQVQYTTTERKTRKVKKTSKRRESKDGEVSVTELEQTNTTNDDGGEYTKAMNKDWHSGHFCCWKCDESLTGQRYVLRDEQPYCIKCYEGVFANGCEECNKIIGIDSKDLSYKDKHWHEACFLCAKCRVSLVDKQFGSKLDKIYCGNCYDAQFASRCDGCGEVFRAVYSVICPYIVGAVPLLVKVL-