| DPOGS210343 | ||
|---|---|---|
| Transcript | DPOGS210343-TA | 177 bp |
| Protein | DPOGS210343-PA | 58 aa |
| Genomic position | DPSCF300025 - 236939-239248 | |
| RNAseq coverage | 25x (Rank: top 77%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005166 | 9e-06 | 50.00% | |
| Bombyx | BGIBMGA011982-TA | 2e-17 | 87.18% | |
| Drosophila | Megalin-PA | 1e-10 | 61.90% | |
| EBI UniRef50 | UniRef50_Q29ID1 | 6e-09 | 66.67% | GA11739 n=3 Tax=Sophophora RepID=Q29ID1_DROPS |
| NCBI RefSeq | XP_001601537.1 | 9e-12 | 76.92% | PREDICTED: similar to GA11739-PA [Nasonia vitripennis] |
| NCBI nr blastp | gi|270015974 | 3e-13 | 84.21% | hypothetical protein TcasGA2_TC004414 [Tribolium castaneum] |
| NCBI nr blastx | gi|270015974 | 4e-15 | 86.49% | hypothetical protein TcasGA2_TC004414 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 1.9e-12 | protein binding | |
| KEGG pathway | aga:AgaP_AGAP012372 | 2e-06 | ||
| K04550 (LRP1, CD91) | maps-> | Malaria | ||
| Alzheimer's disease | ||||
| InterPro domain | [18-53] IPR002172 | 1.9e-12 | Low-density lipoprotein (LDL) receptor class A repeat | |
| Orthology group | MCL34834 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS210343-TA
ATGCAGCCCGGCTCCGCACACGTCTCGCTCCACGCGGGATGCGACACAATATGTCCGAGCGGCATGTTTCGTTGTCCCGAGGGCAAGTGTATTCCGGCTCTCTGGGTCTGCAACTATCAGAGGGACTGCGAGAAAGGAGAGGACGAGTTCCAGTCGTGTCGTAAGTACAACACATAA
>DPOGS210343-PA
MQPGSAHVSLHAGCDTICPSGMFRCPEGKCIPALWVCNYQRDCEKGEDEFQSCRKYNT-