DPOGS210795 | ||
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Transcript | DPOGS210795-TA | 600 bp |
Protein | DPOGS210795-PA | 199 aa |
Genomic position | DPSCF300027 - 1133134-1155056 | |
RNAseq coverage | 2482x (Rank: top 5%) |
Annotation | ||||
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Heliconius | HMEL007742 | 5e-105 | 98.37% |   |
Bombyx | BGIBMGA007110-TA | 1e-96 | 95.95% |   |
Drosophila | Rac1-PA | 1e-101 | 95.63% |   |
EBI UniRef50 | UniRef50_P63000 | 2e-98 | 94.02% | Ras-related C3 botulinum toxin substrate 1 n=319 Tax=root RepID=RAC1_HUMAN |
NCBI RefSeq | XP_623951.1 | 4e-102 | 96.74% | PREDICTED: similar to Ras-related protein Rac1 isoform 1 [Apis mellifera] |
NCBI nr blastp | gi|66558220 | 7e-101 | 96.74% | PREDICTED: ras-related protein Rac1 isoform 1 [Apis mellifera] |
NCBI nr blastx | gi|66558220 | 1e-99 | 96.74% | PREDICTED: ras-related protein Rac1 isoform 1 [Apis mellifera] |
Group | ||||
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Gene Ontology | GO:0007264 | 2.2e-139 | small GTPase mediated signal transduction | |
GO:0005622 | 2.2e-139 | intracellular | ||
GO:0005525 | 2.2e-139 | GTP binding | ||
GO:0015031 | 4.8e-18 | protein transport | ||
GO:0016020 | 1.4e-16 | membrane | ||
GO:0007165 | 1.4e-16 | signal transduction | ||
GO:0006184 | 1.4e-16 | GTP catabolic process | ||
GO:0003924 | 1.4e-16 | GTPase activity | ||
KEGG pathway | ame:551554 | 1e-101 |   | |
  | K04392 (RAC1) | maps-> | Axon guidance | |
  |   |   | Regulation of actin cytoskeleton | |
  |   |   | Fc epsilon RI signaling pathway | |
  |   |   | Toll-like receptor signaling pathway | |
  |   |   | MAPK signaling pathway | |
  |   |   | Fc gamma R-mediated phagocytosis | |
  |   |   | B cell receptor signaling pathway | |
  |   |   | Pathways in cancer | |
  |   |   | Shigellosis | |
  |   |   | Chemokine signaling pathway | |
  |   |   | Leukocyte transendothelial migration | |
  |   |   | Natural killer cell mediated cytotoxicity | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | Phagosome | |
  |   |   | Focal adhesion | |
  |   |   | Colorectal cancer | |
  |   |   | Amyotrophic lateral sclerosis (ALS) | |
  |   |   | Viral myocarditis | |
  |   |   | Bacterial invasion of epithelial cells | |
  |   |   | Adherens junction | |
  |   |   | Renal cell carcinoma | |
  |   |   | Pancreatic cancer | |
  |   |   | Wnt signaling pathway | |
  |   |   | Epithelial cell signaling in Helicobacter pylori infection | |
  |   |   | VEGF signaling pathway | |
InterPro domain | [6-179] IPR003578 | 2.2e-139 | Small GTPase superfamily, Rho type | |
[5-177] IPR001806 | 2.6e-55 | Small GTPase superfamily | ||
[1-139] IPR005225 | 1.2e-38 | Small GTP-binding protein domain | ||
[4-179] IPR003579 | 4.8e-18 | Small GTPase superfamily, Rab type | ||
[1-179] IPR020849 | 1.4e-16 | Small GTPase superfamily, Ras type | ||
Orthology group | MCL11122 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210795-TA
ATGCAGGCCATAAAGTGTGTCGTCGTTGGTGATGGTGCCGTCGGTAAGACATGTCTGCTCATCAGTTATACTACAAATGCCTTCCCCGGCGAGTACATACCGACAGTATTCGATAATTATTCAGCAAATGTGATGGTCGATGGCAAGCCAATCAACCTCGGGCTTTGGGACACGGCTGGTCAGGAGGACTACGACAGGTTGCGACCCCTGTCCTATCCACAGACGGACGTCTTCCTCATATGCTTCTCACTCGTCAACCCAGCTTCCTTCGAGAACGTTCGCGCTAAGTGGTATCCGGAGGTGAGGCATCATTGTCCCTCGACTCCCATCATCCTGGTTGGAACTAAGCTCGACCTCCGCGAGGACAAGGACACCATAGAGAAGCTCAAGGACAAGAAACTGGCCGCCATCACCTACCCTCAGGGTCTCAGCATGGCTAAGGAGATAGGCGCGGTGAAGTACCTCGAGTGCTCCGCCCTCACGCAGAAGGGTTTGAAGACTGTGTTCGACGAGGCCATCCGAGCTGTGCTCTGTCCGGTGCAGCCCGTCAAGATAGTGTACACACCAGTCGACGCCAGTGTAAACATCAAAGCTATATGA
>DPOGS210795-PA
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLREDKDTIEKLKDKKLAAITYPQGLSMAKEIGAVKYLECSALTQKGLKTVFDEAIRAVLCPVQPVKIVYTPVDASVNIKAI-