DPOGS210834 | ||
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Transcript | DPOGS210834-TA | 660 bp |
Protein | DPOGS210834-PA | 219 aa |
Genomic position | DPSCF300027 - 37441-39937 | |
RNAseq coverage | 1902x (Rank: top 7%) |
Annotation | ||||
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Heliconius | HMEL007977 | 2e-87 | 81.82% |   |
Bombyx | BGIBMGA003924-TA | 2e-120 | 91.86% |   |
Drosophila | ND23-PA | 9e-92 | 86.93% |   |
EBI UniRef50 | UniRef50_O00217 | 8e-87 | 84.00% | NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial n=157 Tax=cellular organisms RepID=NDUS8_HUMAN |
NCBI RefSeq | NP_001040316.1 | 1e-118 | 91.40% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
NCBI nr blastp | gi|114051372 | 2e-117 | 91.40% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
NCBI nr blastx | gi|114051372 | 7e-115 | 91.40% | NADH dehydrogenase ubiquinone Fe-S 8 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016020 | 2.4e-50 | membrane | |
GO:0016651 | 2.4e-50 | oxidoreductase activity, acting on NADH or NADPH | ||
GO:0051539 | 2.4e-50 | 4 iron, 4 sulfur cluster binding | ||
GO:0055114 | 2.4e-50 | oxidation-reduction process | ||
GO:0051536 | 1.4e-23 | iron-sulfur cluster binding | ||
GO:0016491 | 1.4e-23 | oxidoreductase activity | ||
KEGG pathway | cqu:CpipJ_CPIJ018590 | 3e-91 |   | |
  | K03941 (NDUFS8) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [76-197] IPR010226 | 2.4e-50 | NADH-quinone oxidoreductase, chain I | |
[78-196] IPR012285 | 1.4e-23 | Fumarate reductase, C-terminal | ||
Orthology group | MCL14963 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS210834-TA
ATGTCTTTAGCAAAAATATTTTCAGTGTCTTCTCGAGTGAGGGCTAGTGGAGCTAGCAATGTTTTAGTACGTTATGCCAGTTCAGGTCAAGAAGGCAAAGTGGAAAAGGTGTATCCACCAAATGTACCTGGATATAAATATGTAAATGCTGAAGATCAGGATATGAGTTTCCGGGAAATGTCCAACAGAGCTGCGCAAACTCTGTTTTGGACTGAATTGGCAAGAGGTTTTGCTGTAACACTTGCACATGTATTTAAGGAACCGGCGACAATCAACTATCCTTTTGAAAAGGGTCCTTTGTCTCCAAGGTTCAGAGGTGAGCATGCATTGAGAAGATATCCATCTGGTGAAGAAAGATGCATTGCTTGTAAGCTGTGTGAAGCTATATGCCCAGCTCAGGCAATCACAATTGAAGCTGAAGAACGCAAAGATGGCTCACGTAGAACAACTAGATACGATATTGATATGACTAAATGCATCTACTGTGGATTCTGTCAGGAGGCTTGTCCAGTTGATGCGATCGTAGAAGGACCGAACTTTGAATTCTCGACCGAAACCCATGAAGAACTCCTTTACAATAAAGAGAAATTACTCTCAAACGGAGACAAATGGGAGAGTGAGATTGCAACTAACATCAGAGCCGATCACCTCTACCGTTAG
>DPOGS210834-PA
MSLAKIFSVSSRVRASGASNVLVRYASSGQEGKVEKVYPPNVPGYKYVNAEDQDMSFREMSNRAAQTLFWTELARGFAVTLAHVFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEERKDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYNKEKLLSNGDKWESEIATNIRADHLYR-