| DPOGS212155 | ||
|---|---|---|
| Transcript | DPOGS212155-TA | 756 bp |
| Protein | DPOGS212155-PA | 251 aa |
| Genomic position | DPSCF300038 + 578948-579794 | |
| RNAseq coverage | 530x (Rank: top 24%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012536 | 2e-95 | 86.39% | |
| Bombyx | BGIBMGA006735-TA | 1e-131 | 88.05% | |
| Drosophila | CG8549-PA | 4e-86 | 63.20% | |
| EBI UniRef50 | UniRef50_E2AUC7 | 5e-105 | 71.03% | Ribosome maturation protein SBDS n=6 Tax=root RepID=E2AUC7_CAMFO |
| NCBI RefSeq | XP_001604171.1 | 1e-114 | 76.10% | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|156553811 | 2e-113 | 76.10% | PREDICTED: ribosome maturation protein SBDS-like [Nasonia vitripennis] |
| NCBI nr blastx | gi|156553811 | 2e-109 | 76.10% | PREDICTED: ribosome maturation protein SBDS-like [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0042254 | 6.1e-40 | ribosome biogenesis | |
| GO:0045727 | 6.1e-40 | positive regulation of translation | ||
| KEGG pathway | ||||
| InterPro domain | [1-248] IPR002140 | 4.7e-148 | Ribosome maturation protein SBDS | |
| [108-228] IPR018978 | 6.1e-40 | Ribosome maturation protein SBDS, C-terminal | ||
| [14-103] IPR019783 | 6.1e-33 | Ribosome maturation protein SBDS, N-terminal | ||
| Orthology group | MCL15046 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212155-TA
ATGTCAAAAATATTTACACCCACAAATCAAATTAGATTAACGAATGTGGCCATAGTTAGATTAAAGAAAGGTGGTAAAAGATTCGAAATAGCATGTTACCGGAATAAAGTGGTATCATGGAGGAATAAGCTGGAGAAAGATATCGATGAAGTTCTTCAAACACATACTGTATTCCTAAATGTATCGAAAGGACAGGTTGCTAAAAAAGAGGATTTAATTAAAATCTTCGGCAAAGACGATCAAACTGAAATATGCAAAGAAATATTAGAAAAGGGAGAACTTCAAGTTTCAGACAAGGAACGACAATCCCAAATTGATTCTCTGTTCAAAGATATAGCAACGACTGTAGCTGACAAATGCATTAACCCAGAAACAAAAAGACCTTATCCAGTTTCTATAATTGAAAAAGCTATGAAAGATATACATTTTTCAGTAAACGTAAACAAAAGTGCCAAGCAACAGTCGCTTGATGTGATACAATTAATAAAGAAAGAAATACCTCTTGAGCGAGCACAAATGAGAGTCAGAATTCAATTACAAGGGAAAGATGCTCGTAAAATAAGAGACAAAGTTGTTAAATTGGTTACAAATGTAGAGGATGAGTCTTGGGATTCCGGCACTGCCAACTTAATATGTCTTATAGACCCTGGGAGCTTCAGGAATTTAGATGAAATGATAAGAACAGATACAAAAGGGAACGGGCAGTTCGAGTTATTGAATCTAAAAGAAATGATTGAAGGAGAGCAAGCTTTGTAA
>DPOGS212155-PA
MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFLNVSKGQVAKKEDLIKIFGKDDQTEICKEILEKGELQVSDKERQSQIDSLFKDIATTVADKCINPETKRPYPVSIIEKAMKDIHFSVNVNKSAKQQSLDVIQLIKKEIPLERAQMRVRIQLQGKDARKIRDKVVKLVTNVEDESWDSGTANLICLIDPGSFRNLDEMIRTDTKGNGQFELLNLKEMIEGEQAL-